Home
Browse
Species Table
Species Tree
Mutant
Mutant Arabidopsis Seeds
Mutant Rice Seeds
Sen-ASVs
Phenotype
Chlorophyll Degradation
Stay-green QTL
Ecotype
Public Transcriptomic
Sen-smallRNA
SAGs in Poplar
SAGs in Kalanchoe serrata
Sen-TF ChIP/DAP-Seq
SAP in Arabidopsis
SAP in Soybean
Targets of Sen-AtlncRNAs
SLAGs and Mutants
Seed-Storage Times
Search
Text Search
BLAST Search
Help
User Guide
FAQs
How to Cite
Download
Links
About
Basic information
Locus name
AT1G49010
Alias
AtMYBL
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:MYB
Effect for Senescence
promote
Gene Description
R-R-type MYB-like Transcription Factor
Evidence
Genetic evidence:Mutant [Ref 1]
References
1: Zhang X, Ju HW, Chung MS, Huang P, Ahn SJ, Kim CS
The R-R-type MYB-like transcription factor, AtMYBL, is involved in promoting leaf senescence and modulates an abiotic stress response in Arabidopsis.
Plant Cell Physiol. 2011 Jan;52(1):138-48
Gene Ontology
molecular function
chromatin binding
Sequence
AT1G49010.1 |
Genomic
|
mRNA
|
CDS
|
Protein
Mutant information
Mutated 1
Mutant name
AtMYBLox
Mutant/Transgenic
transgenic
Ecotype
Col-0
Mutagenesis type
Transgene
Mutated 2
Mutant name
atmybl RNAi
Mutant/Transgenic
mutant
Ecotype
Col-0
Mutagenesis type
RNAi
Ortholog Group
Ortholog Groups:
OG5_147260
Accession
Taxon
NP_196469
Arabidopsis thaliana
NP_564537
( AT1G49010 )
Arabidopsis thaliana
CMT266C
Cyanidioschyzon merolae strain 10D
ACO62496
Micromonas sp. RCC299
NP_001043221
Oryza sativa Japonica Group
NP_001054258
Oryza sativa Japonica Group
estExt_fgenesh1_pg.C_Chr_03.00010215
Ostreococcus tauri
e_gw1.256.18.1
Physcomitrella patens subsp. patens
30131.m007263
Ricinus communis
30174.m008717
Ricinus communis
XP_002954068
Volvox carteri f. nagariensis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
ProSiteProfiles
PS51293
7.0
3
61
IPR017884
SANT domain
SMART
SM00717
0.0
4
59
IPR001005
SANT/Myb domain
PANTHER
PTHR25040
1.2E-70
8
202
No hit
NA
SUPERFAMILY
SSF46689
2.2E-8
8
64
IPR009057
Homeodomain-like
ProSiteProfiles
PS51294
16.9
128
184
IPR017930
Myb domain
SUPERFAMILY
SSF46689
8.2E-17
130
185
IPR009057
Homeodomain-like
SMART
SM00717
2.3E-10
132
182
IPR001005
SANT/Myb domain
TIGRFAM
TIGR01557
4.0E-17
132
182
IPR006447
Myb domain, plants
Pfam
PF00249
6.6E-10
135
179
IPR001005
SANT/Myb domain
Subcellular Localization
Localization
nucleus
Evidence
SUBAcon
Pubmed ID
23180787