Basic information
Locus name	AT3G01080
Alias	WRKY58
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:WRKY
Effect for Senescence	unclear
Gene Description	WRKY family transcription factor. Candidate marker gene for leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Schmid M, Davison TS, Henz SR, Pape UJ, Demar M, Vingron M, Sch_lkopf B, Weigel D, Lohmann JU A gene expression map of Arabidopsis thaliana development. Nat. Genet. 2005 May;37(5):501-6
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function sequence-specific DNA binding transcription factor activity sequence-specific DNA binding
Sequence	AT3G01080.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT3G01080.1  miRNA: ath-miR414 miRNA: ath-miR414 mfe: -38.4 kcal/mol  p-value: 0.000025  position: 782  target 5' A                     U  3'             UGAUGAUGAUGAUGAAGAUGA                 ACUGCUACUACUACUUCUACU      miRNA  3'                          5'
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31221 2.0E-95 99 406 No hit NA SUPERFAMILY SSF118290 2.0E-25 164 225 IPR003657 DNA-binding WRKY SMART SM00774 3.4E-35 166 224 IPR003657 DNA-binding WRKY Pfam PF03106 1.8E-29 167 223 IPR003657 DNA-binding WRKY ProSiteProfiles PS50811 24.0 167 225 IPR003657 DNA-binding WRKY SUPERFAMILY SSF118290 3.5E-29 297 365 IPR003657 DNA-binding WRKY ProSiteProfiles PS50811 37.5 300 365 IPR003657 DNA-binding WRKY Pfam PF03106 7.1E-31 305 363 IPR003657 DNA-binding WRKY SMART SM00774 1.5E-38 305 364 IPR003657 DNA-binding WRKY
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787