|
|
| GenBank ID | AY850134 |
| Alias | OsSGR |
| Organism | Rice (Oryza sativa) |
| Taxonomic identifier | [NCBI] |
| Function category | Chlorophyll degradation |
| Effect for Senescence | promote |
| Gene Description | Senescence inducible chloroplast stay-green protein in rice |
| Evidence | Genetic evidence:Mutant [Ref 1] |
| References | 1: Park SY, Yu JW, Park JS, Li J, Yoo SC, Lee NY, Lee SK, Jeong SW, Seo HS, Koh HJ, Jeon JS, Park YI, Paek NCThe senescence-induced staygreen protein regulates chlorophyll degradation.Plant Cell 2007 May;19(5):1649-642: Cha KW, Lee YJ, Koh HJ, Lee BM, Nam YW, Paek NCIsolation, characterization, and mapping of the stay green mutant in rice.Theor. Appl. Genet. 2002 Mar;104(4):526-532 |
| Sequence | AY850134.1 | mRNA | CDS | Protein
|
|
| Mutated 1 | | Mutant name |
ossgr | | Mutant/Transgenic |
mutant | | Ecotype |
japonica rice Hwacheong- wx |
| Mutagenesis type |
N-methyl-N-nitrosourea (MNU) treatment |
|
| Mutated 2 | | Mutant name |
OsSgr-GFP transgenic rice | | Mutant/Transgenic |
transgenic | | Ecotype |
sgr mutant background |
| Mutagenesis type |
Transgene |
|
miRNA Interaction  | |
|
| Details | | target: AY850134.1
miRNA: osa-miR2099-3p
miRNA: osa-miR2099-3p
mfe: -28.3 kcal/mol
p-value: 0.000824
position: 1152
target 5' A U C 3'
AAUGACGCUGCG GCUUUG
UUAUUGCGAUGU CGAAAC
miRNA 3' C A 5'
|
|
| Ortholog Group | |
|
| Ortholog Groups: OG5_141633 | |
| Cross Link | |
|
|
