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GenBank ID | AY850134 |
Alias | OsSGR |
Organism | Rice (Oryza sativa) |
Taxonomic identifier | [NCBI] |
Function category | Chlorophyll degradation |
Effect for Senescence | promote |
Gene Description | Senescence inducible chloroplast stay-green protein in rice |
Evidence | Genetic evidence:Mutant [Ref 1] |
References | 1: Park SY, Yu JW, Park JS, Li J, Yoo SC, Lee NY, Lee SK, Jeong SW, Seo HS, Koh HJ, Jeon JS, Park YI, Paek NCThe senescence-induced staygreen protein regulates chlorophyll degradation.Plant Cell 2007 May;19(5):1649-642: Cha KW, Lee YJ, Koh HJ, Lee BM, Nam YW, Paek NCIsolation, characterization, and mapping of the stay green mutant in rice.Theor. Appl. Genet. 2002 Mar;104(4):526-532 |
Sequence | AY850134.1 | mRNA | CDS | Protein
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Mutated 1 | Mutant name |
ossgr | Mutant/Transgenic |
mutant | Ecotype |
japonica rice Hwacheong- wx |
Mutagenesis type |
N-methyl-N-nitrosourea (MNU) treatment |
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Mutated 2 | Mutant name |
OsSgr-GFP transgenic rice | Mutant/Transgenic |
transgenic | Ecotype |
sgr mutant background |
Mutagenesis type |
Transgene |
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miRNA Interaction | |
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Details | | target: AY850134.1 miRNA: osa-miR2099-3p miRNA: osa-miR2099-3p mfe: -28.3 kcal/mol p-value: 0.000824
position: 1152 target 5' A U C 3' AAUGACGCUGCG GCUUUG UUAUUGCGAUGU CGAAAC miRNA 3' C A 5'
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Ortholog Group | |
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Ortholog Groups: OG5_141633 | |
Cross Link | |
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