Basic information
Locus name	AT1G66670
Alias	CLPP3
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	One of several nuclear-encoded ClpPs (caseinolytic protease).
Evidence	Molecular evidence:Blast search [Ref 1]
References	1: Snowden KC, Simkin AJ, Janssen BJ, Templeton KR, Loucas HM, Simons JL, Karunairetnam S, Gleave AP, Clark DG, Klee HJ The Decreased apical dominance1/Petunia hybrida CAROTENOID CLEAVAGE DIOXYGENASE8 gene affects branch production and plays a role in leaf senescence, root growth, and flower development. Plant Cell 2005 Mar;17(3):746-59
Gene Ontology	biological process proteolysis molecular function serine-type endopeptidase activity
Sequence	AT1G66670.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127187	Accession Taxon NP_563657 Arabidopsis thaliana NP_564880 ( AT1G66670 ) Arabidopsis thaliana NP_568427 Arabidopsis thaliana NP_568644 Arabidopsis thaliana CMN237C Cyanidioschyzon merolae strain 10D CMQ045C Cyanidioschyzon merolae strain 10D 182996 Chlamydomonas reinhardtii 196557 Chlamydomonas reinhardtii 55336 Chlamydomonas reinhardtii NP_113298 Guillardia theta ACO68821 Micromonas sp. RCC299 ACO68861 Micromonas sp. RCC299 ACO69081 Micromonas sp. RCC299 NP_001043155 Oryza sativa Japonica Group NP_001047512 Oryza sativa Japonica Group NP_001049902 Oryza sativa Japonica Group NP_001053358 Oryza sativa Japonica Group NP_001065516 Oryza sativa Japonica Group e_gw1.02.00.395.1 Ostreococcus tauri e_gw1.05.00.420.1 Ostreococcus tauri estExt_genewise1.C_Chr_01.00010500 Ostreococcus tauri e_gw1.16.90.1 Physcomitrella patens subsp. patens e_gw1.173.42.1 Physcomitrella patens subsp. patens e_gw1.212.30.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_490132 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_102000006 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_4000010 Physcomitrella patens subsp. patens gw1.36.138.1 Physcomitrella patens subsp. patens gw1.390.10.1 Physcomitrella patens subsp. patens 28748.m000214 Ricinus communis 28854.m000050 Ricinus communis 29827.m002597 Ricinus communis 30076.m004646 Ricinus communis 30094.m000676 Ricinus communis fgenesh1_pg.C_chr_1000872 Thalassiosira pseudonana CCMP1335 fgenesh1_pm.C_chr_24000003 Thalassiosira pseudonana CCMP1335 gw1.2.627.1 Thalassiosira pseudonana CCMP1335 XP_002947866 Volvox carteri f. nagariensis XP_002948335 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10381 1.8E-137 14 301 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Hamap MF_00444 36.2 70 259 IPR001907 ClpP SUPERFAMILY SSF52096 4.6E-60 83 258 No hit NA Pfam PF00574 7.6E-71 84 257 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PRINTS PR00127 1.1E-46 85 100 IPR001907 ClpP PRINTS PR00127 1.1E-46 125 145 IPR001907 ClpP PRINTS PR00127 1.1E-46 156 173 IPR001907 ClpP ProSitePatterns PS00381 NA 156 167 IPR018215 ClpP, active site PRINTS PR00127 1.1E-46 177 196 IPR001907 ClpP ProSitePatterns PS00382 NA 178 191 IPR018215 ClpP, active site PRINTS PR00127 1.1E-46 234 253 IPR001907 ClpP
Subcellular Localization
Localization 1 Localization chloroplast Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization plastid Evidence SUBAcon Pubmed ID 23180787