Basic information
Locus name	AT2G32950
Alias	COP1/DET340/FUS1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction (Light)
Effect for Senescence	unclear
Gene Description	Represses photomorphogenesis and induces skotomorphogenesis in the dark.
Evidence	Molecular evidence:15705953 [Ref 1]
References	1: Snowden KC, Simkin AJ, Janssen BJ, Templeton KR, Loucas HM, Simons JL, Karunairetnam S, Gleave AP, Clark DG, Klee HJ The Decreased apical dominance1/Petunia hybrida CAROTENOID CLEAVAGE DIOXYGENASE8 gene affects branch production and plays a role in leaf senescence, root growth, and flower development. Plant Cell 2005 Mar;17(3):746-59
Gene Ontology	molecular function protein binding
Sequence	AT2G32950.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT2G32950.1  miRNA: ath-miR869.2 miRNA: ath-miR869.2 mfe: -32.6 kcal/mol  p-value: 0.001439  position: 927  target 5' A                G     A  3'             GUCAACUGUCUCAAUG CUAGA                 CAGUUGAUAGAGUUGU GGUCU      miRNA  3'                           5'
Ortholog Group
Ortholog Groups: OG5_132181	Accession Taxon NP_180854 ( AT2G32950 ) Arabidopsis thaliana CMK039C Cyanidioschyzon merolae strain 10D ACO65087 Micromonas sp. RCC299 ACO68600 Micromonas sp. RCC299 NP_001048254 Oryza sativa Japonica Group gw1.10.00.133.1 Ostreococcus tauri e_gw1.11.230.1 Physcomitrella patens subsp. patens e_gw1.154.76.1 Physcomitrella patens subsp. patens e_gw1.37.21.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_250181 Physcomitrella patens subsp. patens estExt_Genewise1.C_2640038 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_1350008 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_1800077 Physcomitrella patens subsp. patens estExt_fgenesh2_pg.C_860047 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_810168 Physcomitrella patens subsp. patens 27389.m000067 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF57850 1.0E-18 38 108 No hit NA PANTHER PTHR22847 1.6E-261 45 673 No hit NA Pfam PF13923 2.1E-9 49 91 No hit NA ProSiteProfiles PS50089 12.0 52 90 IPR001841 Zinc finger, RING-type SMART SM00184 4.3E-6 52 89 IPR001841 Zinc finger, RING-type ProSitePatterns PS00518 NA 67 76 IPR017907 Zinc finger, RING-type, conserved site Coils Coil NA 138 162 No hit NA SMART SM00320 0.2 355 399 IPR001680 WD40 repeat ProSiteProfiles PS50294 29.2 367 627 IPR017986 WD40-repeat-containing domain SUPERFAMILY SSF50978 9.3E-57 372 670 IPR017986 WD40-repeat-containing domain SMART SM00320 0.3 410 449 IPR001680 WD40 repeat SMART SM00320 3.3E-7 452 492 IPR001680 WD40 repeat Pfam PF00400 1.8E-6 455 491 IPR001680 WD40 repeat ProSiteProfiles PS50082 10.0 459 491 IPR001680 WD40 repeat SMART SM00320 0.0 493 534 IPR001680 WD40 repeat Pfam PF00400 0.0 507 534 IPR001680 WD40 repeat SMART SM00320 7.6E-8 538 576 IPR001680 WD40 repeat Pfam PF00400 5.7E-8 540 576 IPR001680 WD40 repeat ProSiteProfiles PS50082 13.7 545 585 IPR001680 WD40 repeat ProSitePatterns PS00678 NA 563 577 IPR019775 WD40 repeat, conserved site SMART SM00320 1.1 579 618 IPR001680 WD40 repeat SMART SM00320 340.0 633 672 IPR001680 WD40 repeat
Subcellular Localization
Localization 1 Localization nucleus Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization cytosol,nucleus Evidence SUBAcon Pubmed ID 23180787