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GenBank ID | ACS44349 |
Alias | Sl-EBF1 | Organism | Tomato (Solanum lycopersicon) | Taxonomic identifier | [NCBI] | Function category | Protein degradation/modification:F-box | Effect for Senescence | delay | Gene Description | Sl-EBF1 and Sl-EBF2 expression is regulated by both ethylene and auxin and silencing of Sl-EBF1 and Sl-EBF2 expression caused a constitutive ethylene response phenotype, fertility defect, strong growth arrest, accelerated plant senescence, and fruit ripening. | Evidence | Genetic evidence:Transgene [Ref 1] | References | 1: Yang Y, Wu Y, Pirrello J, Regad F, Bouzayen M, Deng W, Li ZSilencing Sl-EBF1 and Sl-EBF2 expression causes constitutive ethylene response phenotype, accelerated plant senescence, and fruit ripening in tomato.J. Exp. Bot. 2010 Mar;61(3):697-708 | Gene Ontology | | Sequence | ACS44349.1 | mRNA | CDS | Protein
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| Mutant name |
SIEBF1_RNAi | Mutant/Transgenic |
transgenic | Ecotype |
Tomato (Solanum lycopersicum cv. MicroTom) |
Mutagenesis type |
RNAi |
Cross Link | |
| Database | Entry ID | E-value | Start | End | InterPro ID | Description | PANTHER | PTHR23125 | 1.3E-180 | 4 | 665 | No hit | NA | SUPERFAMILY | SSF81383 | 1.8E-7 | 57 | 97 | IPR001810 | F-box domain, cyclin-like | Pfam | PF00646 | 9.0E-4 | 59 | 102 | IPR001810 | F-box domain, cyclin-like | SUPERFAMILY | SSF52047 | 2.7E-38 | 198 | 316 | No hit | NA | SMART | SM00367 | 3.9 | 210 | 235 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 0.0 | 236 | 261 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | Pfam | PF13516 | 0.2 | 262 | 283 | No hit | NA | SMART | SM00367 | 0.0 | 262 | 287 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 6.4E-4 | 288 | 313 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SUPERFAMILY | SSF52058 | 4.4E-6 | 323 | 488 | No hit | NA | SMART | SM00367 | 0.1 | 368 | 393 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | Pfam | PF13516 | 0.8 | 394 | 418 | No hit | NA | SMART | SM00367 | 6.9E-4 | 394 | 419 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 77.0 | 420 | 445 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 0.1 | 474 | 499 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SUPERFAMILY | SSF52047 | 2.7E-38 | 477 | 624 | No hit | NA | SMART | SM00367 | 0.0 | 500 | 525 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 3.9 | 527 | 552 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 7.8 | 554 | 579 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 0.0 | 580 | 604 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | Pfam | PF13516 | 0.0 | 583 | 603 | No hit | NA | SMART | SM00367 | 21.0 | 606 | 631 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype |
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