|
|
GenBank ID | ACS44350 |
Alias | SlEBF2 | Organism | Tomato (Solanum lycopersicon) | Taxonomic identifier | [NCBI] | Function category | Signal transduction:F-box | Effect for Senescence | delay | Gene Description | Sl-EBF1 and Sl-EBF2 expression is regulated by both ethylene and auxin and silencing of Sl-EBF1 and Sl-EBF2 expression caused a constitutive ethylene response phenotype, fertility defect, strong growth arrest, accelerated plant senescence, and fruit ripening. | Evidence | Genetic evidence:Transgene [Ref 1] | References | 1: Yang Y, Wu Y, Pirrello J, Regad F, Bouzayen M, Deng W, Li ZSilencing Sl-EBF1 and Sl-EBF2 expression causes constitutive ethylene response phenotype, accelerated plant senescence, and fruit ripening in tomato.J. Exp. Bot. 2010 Mar;61(3):697-708 | Gene Ontology | | Sequence | ACS44350.1 | mRNA | CDS | Protein
|
| Mutant name |
SIEBF2_RNAi | Mutant/Transgenic |
transgenic | Ecotype |
Tomato (Solanum lycopersicum cv. MicroTom) |
Mutagenesis type |
RNAi |
Cross Link | |
| Database | Entry ID | E-value | Start | End | InterPro ID | Description | PANTHER | PTHR23125 | 4.1E-172 | 4 | 637 | No hit | NA | SUPERFAMILY | SSF81383 | 1.6E-8 | 53 | 97 | IPR001810 | F-box domain, cyclin-like | Pfam | PF00646 | 1.0E-4 | 59 | 99 | IPR001810 | F-box domain, cyclin-like | SMART | SM00256 | 3.1E-4 | 63 | 104 | IPR001810 | F-box domain, cyclin-like | SUPERFAMILY | SSF52047 | 2.8E-39 | 171 | 416 | No hit | NA | SMART | SM00367 | 0.3 | 185 | 210 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | Pfam | PF13516 | 0.0 | 211 | 235 | No hit | NA | SMART | SM00367 | 2.5E-6 | 211 | 236 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | Pfam | PF13516 | 0.0 | 237 | 260 | No hit | NA | SMART | SM00367 | 1.9E-5 | 237 | 262 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | Pfam | PF13516 | 0.6 | 263 | 285 | No hit | NA | SMART | SM00367 | 3.1E-4 | 263 | 288 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SUPERFAMILY | SSF52047 | 2.1E-35 | 295 | 633 | No hit | NA | SMART | SM00367 | 26.0 | 343 | 368 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 0.7 | 369 | 394 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 27.0 | 395 | 420 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 9.7 | 421 | 446 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 1.2 | 448 | 473 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | Pfam | PF13516 | 0.3 | 474 | 493 | No hit | NA | SMART | SM00367 | 6.6 | 474 | 499 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 10.0 | 500 | 525 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 0.1 | 527 | 552 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 3.9 | 553 | 577 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | SMART | SM00367 | 19.0 | 579 | 604 | IPR006553 | Leucine-rich repeat, cysteine-containing subtype | Pfam | PF13504 | 6.5 | 581 | 592 | No hit | NA |
|
|