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Locus name | AT4G16520 |
Alias | ATG8F |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Nutrient recycling:Autophagy |
Effect for Senescence | delay |
Gene Description | autophagy 8f (ATG8F); the cellular processes involving the Atg8 genes function efficiently in young, non-senescing tissues, both under favourable growth conditions and under starvation stresses. |
Evidence | Molecular and physioogic evidence:GUS staining [Ref 1] |
References | 1: Slavikova S, Shy G, Yao Y, Glozman R, Levanony H, Pietrokovski S, Elazar Z, Galili GThe autophagy-associated Atg8 gene family operates both under favourable growth conditions and under starvation stresses in Arabidopsis plants.J. Exp. Bot. 2005 Nov;56(421):2839-49 |
Sequence | AT4G16520.1 | Genomic | mRNA | CDS | Protein AT4G16520.2 | Genomic | mRNA | CDS | Protein
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miRNA Interaction | |
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Details | | target: AT4G16520.1 miRNA: ath-miR1886 miRNA: ath-miR1886 mfe: -26.4 kcal/mol p-value: 0.001518
position: 513 target 5' U C U 3' AUUUCAUUUUACU CUCUC UAAAGUAGAGUGA GAGAG miRNA 3' C A U 5'
target: AT4G16520.2 miRNA: ath-miR1886 miRNA: ath-miR1886 mfe: -26.4 kcal/mol p-value: 0.002202
position: 714 target 5' U C U 3' AUUUCAUUUUACU CUCUC UAAAGUAGAGUGA GAGAG miRNA 3' C A U 5'
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Ortholog Group | |
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Ortholog Groups: OG5_126969 | |
Cross Link | |
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Localization | cytosol |
Evidence | SUBAcon |
Pubmed ID | 23180787 |