Basic information
Locus name	AT1G02670
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	DNA repair protein, putative; FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding; INVOLVED IN: DNA repair. Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function ATP binding DNA binding helicase activity nucleic acid binding
Sequence	AT1G02670.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127144	Accession Taxon NP_171767 ( AT1G02670 ) Arabidopsis thaliana NP_196132 Arabidopsis thaliana NP_197667 Arabidopsis thaliana NP_199166 Arabidopsis thaliana CMR259C Cyanidioschyzon merolae strain 10D 152316 Chlamydomonas reinhardtii 177618 Chlamydomonas reinhardtii ACO60649 Micromonas sp. RCC299 ACO64322 Micromonas sp. RCC299 NP_001047001 Oryza sativa Japonica Group NP_001052168 Oryza sativa Japonica Group NP_001060436 Oryza sativa Japonica Group estExt_Genewise1.C_730104 Physcomitrella patens subsp. patens estExt_fgenesh1_pm.C_410017 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_14000215 Physcomitrella patens subsp. patens 28703.m000017 Ricinus communis 29603.m000529 Ricinus communis 29991.m000632 Ricinus communis e_gw1.6.75.1 Thalassiosira pseudonana CCMP1335 XP_002945661 Volvox carteri f. nagariensis XP_002950941 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10799 0.0 34 677 No hit NA SUPERFAMILY SSF52540 3.2E-44 114 330 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMART SM00487 7.9E-26 130 330 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Pfam PF00176 3.9E-50 137 440 IPR000330 SNF2-related ProSiteProfiles PS51192 18.5 147 324 IPR014001 Helicase, superfamily 1/2, ATP-binding domain SUPERFAMILY SSF52540 1.8E-55 268 308 IPR027417 P-loop containing nucleoside triphosphate hydrolase SUPERFAMILY SSF52540 1.8E-55 498 677 IPR027417 P-loop containing nucleoside triphosphate hydrolase ProSiteProfiles PS51194 14.0 504 669 IPR001650 Helicase, C-terminal SMART SM00490 2.7E-15 539 622 IPR001650 Helicase, C-terminal Pfam PF00271 4.9E-10 545 622 IPR001650 Helicase, C-terminal