Basic information
Locus name	AT1G03970
Alias	GBF4
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation (bZIP)
Effect for Senescence	unclear
Gene Description	GBF4; FUNCTIONS IN: transcription factor activity, sequence-specific DNA binding, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616). Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function sequence-specific DNA binding transcription factor activity sequence-specific DNA binding
Sequence	AT1G03970.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_156386	Accession Taxon NP_171893 ( AT1G03970 ) Arabidopsis thaliana NP_199221 Arabidopsis thaliana 95618 Chlamydomonas reinhardtii NP_001044913 Oryza sativa Japonica Group NP_001055654 Oryza sativa Japonica Group 29863.m001047 Ricinus communis 29955.m001177 Ricinus communis XP_002957643 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22952 4.2E-74 66 249 No hit NA SMART SM00338 1.3E-14 185 249 IPR004827 Basic-leucine zipper domain Pfam PF00170 4.9E-16 186 247 IPR004827 Basic-leucine zipper domain ProSiteProfiles PS50217 11.3 187 239 IPR004827 Basic-leucine zipper domain SUPERFAMILY SSF57959 1.4E-10 189 241 No hit NA ProSitePatterns PS00036 NA 192 207 IPR004827 Basic-leucine zipper domain Coils Coil NA 201 240 No hit NA
Subcellular Localization
Localization 1 Localization nucleus Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization nucleus Evidence SUBAcon Pubmed ID 23180787