|
|
Locus name | AT1G04160 |
Alias | MYOSIN XI B | Organism | Arabidopsis thaliana | Taxonomic identifier | [NCBI] | Function category | Others | Effect for Senescence | unclear | Gene Description | MYOSIN XI B (XIB); FUNCTIONS IN: motor activity; INVOLVED IN: root hair elongation, actin filament-based movement; LOCATED IN: myosin complex; Gene expression is increased during leaf senescence. | Evidence | Genomic evidence:microarray data [Ref 1] | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | Gene Ontology | | Sequence | AT1G04160.1 | Genomic | mRNA | CDS | Protein
|
Ortholog Group | |
| Ortholog Groups: OG5_126577 | |
Cross Link | |
| Database | Entry ID | E-value | Start | End | InterPro ID | Description | PANTHER | PTHR13140 | 0.0 | 1 | 1048 | No hit | NA | Pfam | PF02736 | 1.3E-12 | 11 | 49 | IPR004009 | Myosin, N-terminal, SH3-like | SUPERFAMILY | SSF52540 | 1.3E-284 | 33 | 785 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SMART | SM00242 | 0.0 | 56 | 733 | IPR001609 | Myosin head, motor domain | Pfam | PF00063 | 6.2E-242 | 64 | 720 | IPR001609 | Myosin head, motor domain | PRINTS | PR00193 | 5.6E-62 | 92 | 111 | IPR001609 | Myosin head, motor domain | PRINTS | PR00193 | 5.6E-62 | 149 | 174 | IPR001609 | Myosin head, motor domain | PRINTS | PR00193 | 5.6E-62 | 197 | 224 | IPR001609 | Myosin head, motor domain | PRINTS | PR00193 | 5.6E-62 | 430 | 458 | IPR001609 | Myosin head, motor domain | PRINTS | PR00193 | 5.6E-62 | 483 | 511 | IPR001609 | Myosin head, motor domain | SMART | SM00015 | 21.0 | 734 | 756 | IPR000048 | IQ motif, EF-hand binding site | Pfam | PF00612 | 0.0 | 737 | 755 | IPR000048 | IQ motif, EF-hand binding site | SMART | SM00015 | 0.0 | 757 | 779 | IPR000048 | IQ motif, EF-hand binding site | ProSiteProfiles | PS50096 | 10.0 | 758 | 787 | IPR000048 | IQ motif, EF-hand binding site | Pfam | PF00612 | 1.6E-4 | 761 | 778 | IPR000048 | IQ motif, EF-hand binding site | SMART | SM00015 | 8.7 | 782 | 804 | IPR000048 | IQ motif, EF-hand binding site | ProSiteProfiles | PS50096 | 8.1 | 783 | 810 | IPR000048 | IQ motif, EF-hand binding site | Pfam | PF00612 | 0.0 | 785 | 803 | IPR000048 | IQ motif, EF-hand binding site | SUPERFAMILY | SSF52540 | 6.6E-17 | 785 | 883 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SMART | SM00015 | 37.0 | 805 | 827 | IPR000048 | IQ motif, EF-hand binding site | ProSiteProfiles | PS50096 | 7.3 | 808 | 835 | IPR000048 | IQ motif, EF-hand binding site | Pfam | PF00612 | 0.1 | 809 | 826 | IPR000048 | IQ motif, EF-hand binding site | SMART | SM00015 | 0.0 | 830 | 852 | IPR000048 | IQ motif, EF-hand binding site | ProSiteProfiles | PS50096 | 8.7 | 831 | 860 | IPR000048 | IQ motif, EF-hand binding site | Pfam | PF00612 | 3.0E-4 | 832 | 852 | IPR000048 | IQ motif, EF-hand binding site | SMART | SM00015 | 0.0 | 853 | 875 | IPR000048 | IQ motif, EF-hand binding site | ProSiteProfiles | PS50096 | 8.8 | 854 | 883 | IPR000048 | IQ motif, EF-hand binding site | Pfam | PF00612 | 8.1E-5 | 856 | 875 | IPR000048 | IQ motif, EF-hand binding site | Coils | Coil | NA | 877 | 951 | No hit | NA | Coils | Coil | NA | 972 | 1000 | No hit | NA | Coils | Coil | NA | 1014 | 1049 | No hit | NA | Coils | Coil | NA | 1093 | 1114 | No hit | NA | ProSiteProfiles | PS51126 | 52.4 | 1146 | 1447 | IPR002710 | Dilute | Pfam | PF01843 | 1.1E-32 | 1324 | 1428 | IPR018444 | Dil domain |
|
| Localization | cytosol | Evidence | SUBAcon | Pubmed ID | 23180787 |
|