Basic information
Locus name	AT1G07420
Alias	SMO2-1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Redox regulation
Effect for Senescence	unclear
Gene Description	STEROL 4-ALPHA-METHYL-OXIDASE 2-1 (SMO2-1); FUNCTIONS IN: 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase activity, C-4 methylsterol oxidase activity; INVOLVED IN: oxidation reduction, fatty acid biosynthetic process. Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process fatty acid biosynthetic process oxidation-reduction process molecular function iron ion binding oxidoreductase activity
Sequence	AT1G07420.1 | Genomic | mRNA | CDS | Protein AT1G07420.2 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT1G07420.1  miRNA: ath-miR5021 miRNA: ath-miR5021 mfe: -30.1 kcal/mol  p-value: 0.000027  position: 51  target 5' C                 A  U  3'             UUUCUUCUUCUUCUUCU CA                 AAAGAAGAAGAAGAAGA GU      miRNA  3' A                       5'  target: AT1G07420.2  miRNA: ath-miR5021 miRNA: ath-miR5021 mfe: -30.1 kcal/mol  p-value: 0.000038  position: 28  target 5' C                 A  U  3'             UUUCUUCUUCUUCUUCU CA                 AAAGAAGAAGAAGAAGA GU      miRNA  3' A                       5'
Ortholog Group
Ortholog Groups: OG5_129113	Accession Taxon NP_563789 ( AT1G07420 ) Arabidopsis thaliana NP_565681 Arabidopsis thaliana NP_850133 Arabidopsis thaliana NP_973559 Arabidopsis thaliana CMM277C Cyanidioschyzon merolae strain 10D ACO70020 Micromonas sp. RCC299 NP_001058678 Oryza sativa Japonica Group NP_001068557 Oryza sativa Japonica Group gw1.05.00.392.1 Ostreococcus tauri estExt_Genewise1.C_310022 Physcomitrella patens subsp. patens estExt_fgenesh2_pg.C_1300019 Physcomitrella patens subsp. patens 29751.m001869 Ricinus communis thaps1_ua_kg.chr_1000193 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11863 3.0E-142 2 227 No hit NA Pfam PF04116 2.0E-20 75 187 IPR006694 Fatty acid hydroxylase
Subcellular Localization
Localization	endoplasmic reticulum
Evidence	SUBAcon
Pubmed ID	23180787