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| Locus name | AT1G08050 |
| Organism | Arabidopsis thaliana | | Taxonomic identifier | [NCBI] | | Function category | Protein degradation/modification | | Effect for Senescence | unclear | | Gene Description | zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding, zinc ion binding. Gene expression is increased during leaf senescence. | | Evidence | Genomic evidence:microarray data [Ref 1] | | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | | Gene Ontology | | | Sequence | AT1G08050.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction  | |
| | Details | | target: AT1G08050.1
miRNA: ath-miR398a
miRNA: ath-miR398a
mfe: -37.2 kcal/mol
p-value: 0.000955
position: 1684
target 5' U C G G 3'
GGGGGUGACCUGAG GG GCA
UCCCCACUGGACUC UU UGU
miRNA 3' U G 5'
target: AT1G08050.1
miRNA: ath-miR398b
miRNA: ath-miR398b
mfe: -37.8 kcal/mol
p-value: 0.000363
position: 1684
target 5' U C G G 3'
GGGGGUGACCUGAG GG GCA
UCCCCACUGGACUC UU UGU
miRNA 3' G G 5'
target: AT1G08050.1
miRNA: ath-miR398c
miRNA: ath-miR398c
mfe: -37.8 kcal/mol
p-value: 0.000625
position: 1684
target 5' U C G G 3'
GGGGGUGACCUGAG GG GCA
UCCCCACUGGACUC UU UGU
miRNA 3' G G 5'
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| Ortholog Group | |
| | Ortholog Groups: OG5_131651 | |
| Cross Link | |
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| | Localization | nucleus | | Evidence | SUBAcon | | Pubmed ID | 23180787 |
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