Basic information   
Locus name AT1G08320
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryTranscription regulation (bZIP)
Effect for Senescenceunclear
Gene DescriptionbZIP family transcription factor; FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent. Gene expression is increased during leaf senescence.
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
biological process
molecular function
SequenceAT1G08320.1 | Genomic | mRNA | CDS | Protein
AT1G08320.2 | Genomic | mRNA | CDS | Protein
AT1G08320.3 | Genomic | mRNA | CDS | Protein
miRNA Interaction      
Details
target: AT1G08320.1 
miRNA: ath-miR783
miRNA: ath-miR783
mfe: -29.7 kcal/mol 
p-value: 0.004218 

position: 179 
target 5' C   C   A              A  3' 
           GAA CAU GAAUGAGCGAAGCU     
           CUU GUA CUUGCUCGUUUCGA     
miRNA  3'                        A  5' 

target: AT1G08320.1 
miRNA: ath-miR847
miRNA: ath-miR847
mfe: -32.5 kcal/mol 
p-value: 0.001050 

position: 379 
target 5' U                     G  3' 
           UAUUAGGAGGAGGAGGAG GA     
           GUAGUUCUUCUUCUCCUC CU     
miRNA  3'                    A     5' 

target: AT1G08320.3 
miRNA: ath-miR783
miRNA: ath-miR783
mfe: -29.7 kcal/mol 
p-value: 0.004456 

position: 275 
target 5' C   C   A              A  3' 
           GAA CAU GAAUGAGCGAAGCU     
           CUU GUA CUUGCUCGUUUCGA     
miRNA  3'                        A  5' 

target: AT1G08320.3 
miRNA: ath-miR847
miRNA: ath-miR847
mfe: -32.5 kcal/mol 
p-value: 0.001132 

position: 475 
target 5' U                     G  3' 
           UAUUAGGAGGAGGAGGAG GA     
           GUAGUUCUUCUUCUCCUC CU     
miRNA  3'                    A     5' 
Ortholog Group      
Ortholog Groups: OG5_156291
AccessionTaxon
NP_001030998Arabidopsis thaliana
NP_001030999 ( AT1G08320 ) Arabidopsis thaliana
NP_563810Arabidopsis thaliana
NP_001044868Oryza sativa Japonica Group
NP_001055678Oryza sativa Japonica Group
NP_001065772Oryza sativa Japonica Group
NP_001066179Oryza sativa Japonica Group
30055.m001550Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR229526.0E-14316338No hitNA
SMARTSM003381.2E-650127IPR004827Basic-leucine zipper domain
ProSiteProfilesPS502179.35296IPR004827Basic-leucine zipper domain
PfamPF001705.9E-85394IPR004827Basic-leucine zipper domain
SUPERFAMILYSSF579594.8E-75496No hitNA
ProSitePatternsPS00036NA5772IPR004827Basic-leucine zipper domain
CoilsCoilNA73101No hitNA
PfamPF141441.3E-29134212IPR025422DOG1 domain