Basic information
Locus name	AT1G08800
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	Unknown protein. Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT1G08800.1 | Genomic | mRNA | CDS | Protein AT1G08800.2 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT1G08800.1  miRNA: ath-miR774b-3p miRNA: ath-miR774b-3p mfe: -27.1 kcal/mol  p-value: 0.006103  position: 2944  target 5' A    G          A     A  3'             UCGA GGUGAAAGUG GGGUG                 AGCU CUACUUUUAU CCUAC      miRNA  3' A               A        5'  target: AT1G08800.2  miRNA: ath-miR774b-3p miRNA: ath-miR774b-3p mfe: -27.1 kcal/mol  p-value: 0.006234  position: 3018  target 5' A    G          A     A  3'             UCGA GGUGAAAGUG GGGUG                 AGCU CUACUUUUAU CCUAC      miRNA  3' A               A        5'
Ortholog Group
Ortholog Groups: OG5_177364	Accession Taxon NP_001117250 ( AT1G08800 ) Arabidopsis thaliana NP_172357 Arabidopsis thaliana NP_001044407 Oryza sativa Japonica Group 29680.m001661 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31448 1.6E-200 4 1112 No hit NA Pfam PF04576 1.3E-32 891 983 IPR007656 Zein-binding domain Coils Coil NA 961 989 No hit NA