Basic information
Locus name	AT1G09140
Alias	SRP30
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	SF2/ASF-like splicing modulator (SRP30); FUNCTIONS IN: RNA binding. Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function nucleic acid binding
Sequence	AT1G09140.1 | Genomic | mRNA | CDS | Protein AT1G09140.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128933	Accession Taxon NP_001078264 Arabidopsis thaliana NP_172386 ( AT1G09140 ) Arabidopsis thaliana NP_190512 Arabidopsis thaliana NP_563665 Arabidopsis thaliana NP_567235 Arabidopsis thaliana NP_683288 Arabidopsis thaliana NP_850933 Arabidopsis thaliana NP_850934 Arabidopsis thaliana 195847 Chlamydomonas reinhardtii NP_001050082 Oryza sativa Japonica Group NP_001055323 Oryza sativa Japonica Group NP_001060608 Oryza sativa Japonica Group e_gw1.173.63.1 Physcomitrella patens subsp. patens e_gw1.7.233.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_280136 Physcomitrella patens subsp. patens 29827.m002610 Ricinus communis 29986.m001610 Ricinus communis 30128.m008837 Ricinus communis 30128.m008840 Ricinus communis XP_002955406 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10548 1.0E-124 2 248 No hit NA SUPERFAMILY SSF54928 5.4E-36 6 174 No hit NA ProSiteProfiles PS50102 17.3 7 82 IPR000504 RNA recognition motif domain SMART SM00360 1.5E-20 8 78 IPR000504 RNA recognition motif domain Pfam PF00076 3.0E-17 9 76 IPR000504 RNA recognition motif domain ProSiteProfiles PS50102 10.0 109 187 IPR000504 RNA recognition motif domain SMART SM00360 9.4E-7 110 183 IPR000504 RNA recognition motif domain Pfam PF00076 8.1E-11 111 173 IPR000504 RNA recognition motif domain
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787