Basic information
Locus name	AT1G09560
Alias	GLP5
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Nutrient recycling
Effect for Senescence	unclear
Gene Description	GERMIN-LIKE PROTEIN 5 (GLP5); FUNCTIONS IN: manganese ion binding, nutrient reservoir activity. Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	cellular component apoplast molecular function manganese ion binding
Sequence	AT1G09560.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_133561	Accession Taxon NP_001031983 Arabidopsis thaliana NP_001119334 Arabidopsis thaliana NP_172427 ( AT1G09560 ) Arabidopsis thaliana NP_187065 Arabidopsis thaliana NP_187067 Arabidopsis thaliana NP_187068 Arabidopsis thaliana NP_187069 Arabidopsis thaliana NP_187070 Arabidopsis thaliana NP_187246 Arabidopsis thaliana NP_198727 Arabidopsis thaliana NP_198728 Arabidopsis thaliana NP_198729 Arabidopsis thaliana NP_198731 Arabidopsis thaliana NP_198732 Arabidopsis thaliana NP_198734 Arabidopsis thaliana NP_198735 Arabidopsis thaliana NP_001046874 Oryza sativa Japonica Group NP_001046875 Oryza sativa Japonica Group NP_001046876 Oryza sativa Japonica Group e_gw1.337.15.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_210146 Physcomitrella patens subsp. patens estExt_fgenesh1_kg.C_3380002 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_680008 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_680016 Physcomitrella patens subsp. patens fgenesh1_kg.scaffold_21000004 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_68000013 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_273000004 Physcomitrella patens subsp. patens 30075.m001164 Ricinus communis 30075.m001165 Ricinus communis 30075.m001166 Ricinus communis 30075.m001167 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31238 1.3E-122 1 219 No hit NA SUPERFAMILY SSF51182 3.7E-46 52 217 IPR011051 RmlC-like cupin domain SMART SM00835 1.2E-35 61 209 IPR006045 Cupin 1 Pfam PF00190 1.2E-29 63 207 IPR006045 Cupin 1 ProSitePatterns PS00725 NA 104 117 IPR019780 Germin, manganese binding site PRINTS PR00325 8.0E-27 109 129 IPR001929 Germin PRINTS PR00325 8.0E-27 139 159 IPR001929 Germin PRINTS PR00325 8.0E-27 172 187 IPR001929 Germin
Subcellular Localization
Localization	extracellular
Evidence	SUBAcon
Pubmed ID	23180787