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About
Basic information
Locus name
AT2G40220
Alias
ABI4/ERF052/GIN6/ISI3/SAN5/SIS5/SUN6
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Hormone response pathway:ABA
Effect for Senescence
promote
Gene Description
encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4).
Evidence
Molecular evidence [Ref 1]
References
1: Pourtau N, Mar��s M, Purdy S, Quentin N, Ru_l A, Wingler A
Interactions of abscisic acid and sugar signalling in the regulation of leaf senescence.
Planta 2004 Sep;219(5):765-72
Gene Ontology
biological process
regulation of transcription, DNA-dependent
molecular function
sequence-specific DNA binding transcription factor activity
Sequence
AT2G40220.1 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_212289
Accession
Taxon
NP_181551
( AT2G40220 )
Arabidopsis thaliana
29814.m000739
Ricinus communis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR31241
1.7E-30
43
123
No hit
NA
Pfam
PF00847
4.8E-15
54
103
IPR001471
AP2/ERF domain
ProSiteProfiles
PS51032
22.2
54
111
IPR001471
AP2/ERF domain
SMART
SM00380
3.4E-39
54
117
IPR001471
AP2/ERF domain
SUPERFAMILY
SSF54171
1.2E-20
54
111
IPR016177
DNA-binding, integrase-type
PRINTS
PR00367
2.5E-10
55
66
IPR001471
AP2/ERF domain
PRINTS
PR00367
2.5E-10
77
93
IPR001471
AP2/ERF domain
Subcellular Localization
Localization
nucleus
Evidence
SUBAcon
Pubmed ID
23180787