Basic information
Locus name	AT1G09910
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Lipid/Carbohydrate metabolism
Effect for Senescence	unclear
Gene Description	lyase; FUNCTIONS IN: lyase activity; INVOLVED IN: carbohydrate metabolic process. Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process carbohydrate metabolic process molecular function carbohydrate binding catalytic activity
Sequence	AT1G09910.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_133765	Accession Taxon NP_172459 Arabidopsis thaliana NP_172460 Arabidopsis thaliana NP_172462 ( AT1G09910 ) Arabidopsis thaliana NP_179847 Arabidopsis thaliana NP_195508 Arabidopsis thaliana NP_195516 Arabidopsis thaliana NP_567703 Arabidopsis thaliana NP_001062464 Oryza sativa Japonica Group NP_001062465 Oryza sativa Japonica Group NP_001065674 Oryza sativa Japonica Group NP_001066077 Oryza sativa Japonica Group e_gw1.60.161.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1170088 Physcomitrella patens subsp. patens 28333.m000572 Ricinus communis 28333.m000588 Ricinus communis 29596.m000701 Ricinus communis 29596.m000702 Ricinus communis 29596.m000705 Ricinus communis 29596.m000706 Ricinus communis 29596.m000707 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR32018 0.0 1 675 No hit NA Pfam PF06045 7.8E-108 42 243 IPR010325 Rhamnogalacturonate lyase SUPERFAMILY SSF74650 2.1E-10 58 106 IPR011013 Galactose mutarotase-like domain SUPERFAMILY SSF74650 2.1E-10 137 336 IPR011013 Galactose mutarotase-like domain SUPERFAMILY SSF49452 2.8E-8 412 470 IPR013784 Carbohydrate-binding-like fold SUPERFAMILY SSF49785 3.6E-53 480 671 IPR008979 Galactose-binding domain-like Coils Coil NA 586 607 No hit NA