Leaf Senescence DataBase

Basic information

Locus name

AT1G52340

Alias

GIN1/ABA2

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

Hormone response pathway:ABA

Effect for Senescence

delay

Gene Description

the aba1-1 and aba2-1 mutants showed accelerated senescence compared to their wild types on glucose-containing medium

Evidence

Genetic evidence:Mutant [Ref 1]

References

1: Pourtau N, Mar��s M, Purdy S, Quentin N, Ru_l A, Wingler A
Interactions of abscisic acid and sugar signalling in the regulation of leaf senescence.
Planta 2004 Sep;219(5):765-72

Gene Ontology

biological process	metabolic process
molecular function	oxidoreductase activity

Sequence

AT1G52340.1 | Genomic | mRNA | CDS | Protein

Mutant information

Mutant name

aba2-1

Mutant/Transgenic

mutant

Ecotype

Col-0

Mutagenesis type

EMS

miRNA Interaction

Details


target: AT1G52340.1 miRNA: ath-miR857 miRNA: ath-miR857 mfe: -22.8 kcal/mol p-value: 0.018937 position: 422 target 5' G A A U 3' AUAUACUU UCAACA UGCAGGA UAUGUGGA AGUUGU AUGUUUU miRNA 3' 5'

Ortholog Group

Ortholog Groups: OG5_169253

Accession	Taxon
NP_175644 ( AT1G52340 )	Arabidopsis thaliana

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PANTHER	PTHR24322	3.2E-56	17	273	No hit	NA
SUPERFAMILY	SSF51735	7.0E-73	20	276	No hit	NA
PRINTS	PR00081	2.1E-37	22	39	IPR002347	Glucose/ribitol dehydrogenase
Pfam	PF13561	2.7E-28	30	275	No hit	NA
PRINTS	PR00080	4.0E-12	98	109	IPR002198	Short-chain dehydrogenase/reductase SDR
PRINTS	PR00081	2.1E-37	98	109	IPR002347	Glucose/ribitol dehydrogenase
PRINTS	PR00081	2.1E-37	147	163	IPR002347	Glucose/ribitol dehydrogenase
PRINTS	PR00080	4.0E-12	153	161	IPR002198	Short-chain dehydrogenase/reductase SDR
PRINTS	PR00080	4.0E-12	173	192	IPR002198	Short-chain dehydrogenase/reductase SDR
PRINTS	PR00081	2.1E-37	173	192	IPR002347	Glucose/ribitol dehydrogenase
PRINTS	PR00081	2.1E-37	194	211	IPR002347	Glucose/ribitol dehydrogenase
PRINTS	PR00081	2.1E-37	238	258	IPR002347	Glucose/ribitol dehydrogenase

Subcellular Localization

Localization 1
	Localization	cytosol
	Evidence	Localization with GFP-fusion protein (GFP:cDNA)
	Pubmed ID	10737809