Basic information
Locus name	AT5G52300
Alias	RD29B
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Environmental factors
Effect for Senescence	delay
Gene Description	encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication.
Evidence	Genetic evidence:Transgene [Ref 1]
References	1: Yang SD, Seo PJ, Yoon HK, Park CM The Arabidopsis NAC transcription factor VNI2 integrates abscisic acid signals into leaf senescence via the COR/RD genes. Plant Cell 2011 Jun;23(6):2155-68
Sequence	AT5G52300.1 | Genomic | mRNA | CDS | Protein AT5G52300.2 | Genomic | mRNA | CDS | Protein
Mutant information
Mutant name	35S:RD29B
Mutant/Transgenic	transgenic
Ecotype	Col-0
Mutagenesis type	transgene
miRNA Interaction
Details	target: AT5G52300.1  miRNA: ath-miR414 miRNA: ath-miR414 mfe: -31.3 kcal/mol  p-value: 0.001012  position: 338  target 5' A               U    C  3'             GAUGAUGAUGAUGAG AUGA                 CUGCUACUACUACUU UACU      miRNA  3' A               C       5'  target: AT5G52300.2  miRNA: ath-miR414 miRNA: ath-miR414 mfe: -31.3 kcal/mol  p-value: 0.001011  position: 335  target 5' A               U    C  3'             GAUGAUGAUGAUGAG AUGA                 CUGCUACUACUACUU UACU      miRNA  3' A               C       5'
Ortholog Group
Ortholog Groups: OG5_164276	Accession Taxon NP_001032061 Arabidopsis thaliana NP_194288 Arabidopsis thaliana NP_200043 ( AT5G52300 ) Arabidopsis thaliana NP_200044 Arabidopsis thaliana NP_001065009 Oryza sativa Japonica Group 30147.m013744 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description Pfam PF07918 1.5E-10 388 412 IPR012418 CAP160