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Locus name | AT5G20250 |
Alias | DIN10 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Lipid/Carbohydrate metabolism |
Effect for Senescence | unclear |
Gene Description | Expressed in 24 hours imbibed seeds and during leaf senescence |
Evidence | Molecular evidence:Northern [Ref 1] |
References | 1: Fujiki Y, Yoshikawa Y, Sato T, Inada N, Ito M, Nishida I, Watanabe ADark-inducible genes from Arabidopsis thaliana are associated with leaf senescence and repressed by sugars.Physiol Plant 2001 Mar;111(3):345-352 |
Sequence | AT5G20250.1 | Genomic | mRNA | CDS | Protein AT5G20250.2 | Genomic | mRNA | CDS | Protein AT5G20250.3 | Genomic | mRNA | CDS | Protein
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miRNA Interaction | |
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Details | | target: AT5G20250.1 miRNA: ath-miR2112-3p miRNA: ath-miR2112-3p mfe: -24.0 kcal/mol p-value: 0.036069
position: 1555 target 5' G A C U 3' GUGUGAA GUGGAUGUG AG CGCGUUU CGCCUAUAU UC miRNA 3' A A U 5'
target: AT5G20250.2 miRNA: ath-miR2112-3p miRNA: ath-miR2112-3p mfe: -24.0 kcal/mol p-value: 0.034827
position: 1464 target 5' G A C U 3' GUGUGAA GUGGAUGUG AG CGCGUUU CGCCUAUAU UC miRNA 3' A A U 5'
target: AT5G20250.3 miRNA: ath-miR2112-3p miRNA: ath-miR2112-3p mfe: -24.0 kcal/mol p-value: 0.036199
position: 1565 target 5' G A C U 3' GUGUGAA GUGGAUGUG AG CGCGUUU CGCCUAUAU UC miRNA 3' A A U 5'
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Ortholog Group | |
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Ortholog Groups: OG5_132749 | |
Cross Link | |
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Localization 1 | Localization | cytosol | Evidence | SUBAcon | Pubmed ID | 23180787 |
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Localization 2 | Localization | plastid | Evidence | SUBAcon | Pubmed ID | 23180787 |
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