Basic information
Locus name	AT5G20250
Alias	DIN10
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Lipid/Carbohydrate metabolism
Effect for Senescence	unclear
Gene Description	Expressed in 24 hours imbibed seeds and during leaf senescence
Evidence	Molecular evidence:Northern [Ref 1]
References	1: Fujiki Y, Yoshikawa Y, Sato T, Inada N, Ito M, Nishida I, Watanabe A Dark-inducible genes from Arabidopsis thaliana are associated with leaf senescence and repressed by sugars. Physiol Plant 2001 Mar;111(3):345-352
Sequence	AT5G20250.1 | Genomic | mRNA | CDS | Protein AT5G20250.2 | Genomic | mRNA | CDS | Protein AT5G20250.3 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT5G20250.1  miRNA: ath-miR2112-3p miRNA: ath-miR2112-3p mfe: -24.0 kcal/mol  p-value: 0.036069  position:  1555  target 5' G       A         C  U 3'             GUGUGAA GUGGAUGUG AG              CGCGUUU CGCCUAUAU UC   miRNA  3' A       A         U    5'  target: AT5G20250.2  miRNA: ath-miR2112-3p miRNA: ath-miR2112-3p mfe: -24.0 kcal/mol  p-value: 0.034827  position:  1464  target 5' G       A         C  U 3'             GUGUGAA GUGGAUGUG AG              CGCGUUU CGCCUAUAU UC   miRNA  3' A       A         U    5'  target: AT5G20250.3  miRNA: ath-miR2112-3p miRNA: ath-miR2112-3p mfe: -24.0 kcal/mol  p-value: 0.036199  position:  1565  target 5' G       A         C  U 3'             GUGUGAA GUGGAUGUG AG              CGCGUUU CGCCUAUAU UC   miRNA  3' A       A         U    5'
Ortholog Group
Ortholog Groups: OG5_132749	Accession Taxon NP_001031910 ( AT5G20250 ) Arabidopsis thaliana NP_175970 Arabidopsis thaliana NP_191311 Arabidopsis thaliana NP_197525 Arabidopsis thaliana NP_850715 Arabidopsis thaliana NP_851044 Arabidopsis thaliana NP_974451 Arabidopsis thaliana 205571 Chlamydomonas reinhardtii ACO69369 Micromonas sp. RCC299 NP_001051653 Oryza sativa Japonica Group NP_001053108 Oryza sativa Japonica Group NP_001056942 Oryza sativa Japonica Group NP_001059166 Oryza sativa Japonica Group NP_001062133 Oryza sativa Japonica Group e_gw1.06.00.67.1 Ostreococcus tauri e_gw1.2626.1.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_100087 Physcomitrella patens subsp. patens estExt_fgenesh1_pm.C_80005 Physcomitrella patens subsp. patens 28525.m000270 Ricinus communis 28543.m000400 Ricinus communis 29761.m000419 Ricinus communis 29805.m001530 Ricinus communis 30147.m013837 Ricinus communis e_gw1.1.117.1 Thalassiosira pseudonana CCMP1335 XP_002959323 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31268 0.0 2 748 No hit NA Pfam PF05691 0.0 7 731 IPR008811 Raffinose synthase SUPERFAMILY SSF51445 2.3E-58 201 315 IPR017853 Glycoside hydrolase, superfamily SUPERFAMILY SSF51445 2.3E-58 353 518 IPR017853 Glycoside hydrolase, superfamily
Subcellular Localization
Localization 1 Localization cytosol Evidence SUBAcon Pubmed ID 23180787
Localization 2 Localization plastid Evidence SUBAcon Pubmed ID 23180787