Basic information
Locus name	LOC_Os01g42810
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	Leaf senescence related protein, putative, expressed
Evidence	Molecular evidence:Homolog analysis [Ref 1]
References	1: Ouyang S, Zhu W, Hamilton J, Lin H, Campbell M, Childs K, Thibaud-Nissen F, Malek RL, Lee Y, Zheng L, Orvis J, Haas B, Wortman J, Buell CR The TIGR Rice Genome Annotation Resource: improvements and new features. Nucleic Acids Res. 2007 Jan;35(Database issue):D883-7
Sequence	LOC_Os01g42810.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: LOC_Os01g42810.1  miRNA: osa-miR394 miRNA: osa-miR394 mfe: -32.9 kcal/mol  p-value: 0.001255  position: 988  target 5' U     C              U  3'             GGAGG GGACGGAA GCCGG                 CCUCC CCUGUCUU CGGUU      miRNA  3'       A        A        5'  target: LOC_Os01g42810.1  miRNA: osa-miR5075 miRNA: osa-miR5075 mfe: -42.4 kcal/mol  p-value: 0.000113  position: 588  target 5' G                 C    G  3'             GCGG CGGCGGCGGCGG GGGA                 CGCC GCCGCCGCUGCC UCUU      miRNA  3'      U                    5'
Ortholog Group
Ortholog Groups: OG5_242600	Accession Taxon NP_001043565 ( LOC_Os01g42810 ) Oryza sativa Japonica Group NP_001056472 Oryza sativa Japonica Group
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR32285 1.0E-142 115 479 No hit NA Pfam PF14416 4.1E-21 128 184 IPR025846 PMR5 N-terminal domain Pfam PF13839 9.3E-65 202 471 IPR026057 PC-Esterase