Basic information
Locus name	LOC_Os06g12870
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	Leaf senescence related protein, putative, expressed
Evidence	Molecular evidence:Homolog analysis [Ref 1]
References	1: Ouyang S, Zhu W, Hamilton J, Lin H, Campbell M, Childs K, Thibaud-Nissen F, Malek RL, Lee Y, Zheng L, Orvis J, Haas B, Wortman J, Buell CR The TIGR Rice Genome Annotation Resource: improvements and new features. Nucleic Acids Res. 2007 Jan;35(Database issue):D883-7
Sequence	LOC_Os06g12870.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: LOC_Os06g12870.1  miRNA: osa-miR3979-5p miRNA: osa-miR3979-5p mfe: -35.3 kcal/mol  p-value: 0.000756  position: 1185  target 5' C  A             U    C  3'             GC CUUCGAGGGGGAG GGGA                 CG GAAGUUCCCUCUC CUCU      miRNA  3'                  U       5'
Ortholog Group
Ortholog Groups: OG5_177628	Accession Taxon NP_177180 Arabidopsis thaliana NP_001057240 ( LOC_Os06g12870 ) Oryza sativa Japonica Group NP_001063036 Oryza sativa Japonica Group 29168.m000381 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR32285 2.6E-140 107 468 No hit NA Pfam PF14416 5.3E-22 107 160 IPR025846 PMR5 N-terminal domain Pfam PF13839 4.4E-50 161 466 IPR026057 PC-Esterase