Basic information
GenBank ID	BN000093
Alias	HvSF42
Organism	Barley (Hordeum vulgare)
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	senescence-specific gene.Hordeum vulgare mRNA for putative cysteine proteinase.mRNA accumulated during senescence of flag leaves as well as during dark-induced senescence of attached primary foliage leaves.
Evidence	Molecular evidence:SSH [Ref 1]
References	1: Steiner-Lange S, Fischer A, Boettcher A, Rouhara I, Liedgens H, Schmelzer E, Knogge W Differential defense reactions in leaf tissues of barley in response to infection by Rhynchosporium secalis and to treatment with a fungal avirulence gene product. Mol. Plant Microbe Interact. 2003 Oct;16(10):893-902
Gene Ontology	biological process proteolysis molecular function cysteine-type peptidase activity
Sequence	BN000093.1 | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12411 5.5E-216 44 374 IPR013128 Peptidase C1A, papain SUPERFAMILY SSF54001 2.1E-99 46 367 No hit NA Pfam PF08246 2.4E-10 53 109 IPR013201 Proteinase inhibitor I29, cathepsin propeptide SMART SM00848 3.2E-19 53 109 IPR013201 Proteinase inhibitor I29, cathepsin propeptide Pfam PF00112 3.4E-72 142 367 IPR000668 Peptidase C1A, papain C-terminal SMART SM00645 3.6E-102 142 369 IPR000668 Peptidase C1A, papain C-terminal PRINTS PR00705 1.8E-10 160 175 IPR000668 Peptidase C1A, papain C-terminal ProSitePatterns PS00139 NA 160 171 IPR000169 Cysteine peptidase, cysteine active site ProSitePatterns PS00639 NA 306 316 IPR025660 Cysteine peptidase, histidine active site PRINTS PR00705 1.8E-10 308 318 IPR000668 Peptidase C1A, papain C-terminal PRINTS PR00705 1.8E-10 330 336 IPR000668 Peptidase C1A, papain C-terminal ProSitePatterns PS00640 NA 330 349 IPR025661 Cysteine peptidase, asparagine active site