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About
Basic information
GenBank ID
AK059358
Alias
IGPS
Organism
Rice (
Oryza sativa
)
Taxonomic identifier
[NCBI]
Function category
Protein degradation/modification
Effect for Senescence
unclear
Gene Description
Trp biosynthetic pathway
Evidence
Molecular evidence:Northern [Ref 1]
References
1: Kang K, Kim YS, Park S, Back K
Senescence-induced serotonin biosynthesis and its role in delaying senescence in rice leaves.
Plant Physiol. 2009 Jul;150(3):1380-93
Gene Ontology
biological process
tryptophan metabolic process
molecular function
catalytic activity
indole-3-glycerol-phosphate synthase activity
Pathway
KEGG
map00400
 (EC 4.1.1.48)
Sequence
AK059358.1 |
mRNA
|
CDS
|
Protein
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR22854
4.0E-147
64
355
No hit
NA
Hamap
MF_00134_B
31.0
109
378
IPR013798
Indole-3-glycerol phosphate synthase
Pfam
PF00218
2.2E-71
111
355
IPR013798
Indole-3-glycerol phosphate synthase
SUPERFAMILY
SSF51366
4.8E-70
118
355
IPR011060
Ribulose-phosphate binding barrel
ProSitePatterns
PS00614
NA
163
181
IPR001468
Indole-3-glycerol phosphate synthase, conserved site