Basic information
GenBank ID	AK066734
Alias	TSα
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	Trp biosynthetic pathway
Evidence	Molecular evidence:Northern [Ref 1]
References	1: Kang K, Kim YS, Park S, Back K Senescence-induced serotonin biosynthesis and its role in delaying senescence in rice leaves. Plant Physiol. 2009 Jul;150(3):1380-93
Gene Ontology	biological process tryptophan metabolic process molecular function tryptophan synthase activity
Pathway	KEGG map00260 (EC 4.2.1.20) map00400 (EC 4.2.1.20)
Sequence	AK066734.1 | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_130207	Accession Taxon NP_192170 Arabidopsis thaliana NP_567004 Arabidopsis thaliana CMV006C Cyanidioschyzon merolae strain 10D 81238 Chlamydomonas reinhardtii ACO61559 Micromonas sp. RCC299 NP_001051559 Oryza sativa Japonica Group NP_001051560 Oryza sativa Japonica Group NP_001051561 Oryza sativa Japonica Group NP_001051562 Oryza sativa Japonica Group NP_001059049 ( AK066734 ) Oryza sativa Japonica Group e_gw1.04.00.381.1 Ostreococcus tauri e_gw1.13.326.1 Physcomitrella patens subsp. patens 29883.m001987 Ricinus communis XP_002953501 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10314 1.9E-88 51 232 No hit NA SUPERFAMILY SSF51366 5.2E-89 68 308 IPR011060 Ribulose-phosphate binding barrel Pfam PF00290 2.5E-98 72 327 IPR002028 Tryptophan synthase, alpha chain TIGRFAM TIGR00262 6.7E-92 72 325 IPR002028 Tryptophan synthase, alpha chain Hamap MF_00131 36.8 78 327 IPR002028 Tryptophan synthase, alpha chain ProSitePatterns PS00167 NA 112 125 IPR018204 Tryptophan synthase, alpha chain, active site