Basic information
GenBank ID	AK243037
Alias	GS
Organism	Rice (Oryza sativa)
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	Gln synthetase
Evidence	Molecular evidence:Northern [Ref 1]
References	1: Kang K, Kim YS, Park S, Back K Senescence-induced serotonin biosynthesis and its role in delaying senescence in rice leaves. Plant Physiol. 2009 Jul;150(3):1380-93
Gene Ontology	biological process glutamine biosynthetic process nitrogen compound metabolic process molecular function glutamate-ammonia ligase activity
Pathway	KEGG map00250 (EC 6.3.1.2) map00330 (EC 6.3.1.2) map00910 (EC 6.3.1.2) MetaCyc PWY-3282
Sequence	AK243037.1 | mRNA | CDS | Protein
miRNA Interaction
Details	target: AK243037.1  miRNA: osa-miR2103 miRNA: osa-miR2103 mfe: -39.9 kcal/mol  p-value: 0.000243  position: 1026  target 5' G       A        A     G  3'             GGGCGCG CACGGAGA GGAGG                 CUCGCGC GUGCCUCU CCUUU      miRNA  3' G                C        5'
Ortholog Group
Ortholog Groups: OG5_127569	Accession Taxon NP_001031969 Arabidopsis thaliana NP_001078639 Arabidopsis thaliana NP_175280 Arabidopsis thaliana NP_176794 Arabidopsis thaliana NP_188409 Arabidopsis thaliana NP_198413 Arabidopsis thaliana NP_198576 Arabidopsis thaliana NP_568335 Arabidopsis thaliana CMI233C Cyanidioschyzon merolae strain 10D 129468 Chlamydomonas reinhardtii 133971 Chlamydomonas reinhardtii 136895 Chlamydomonas reinhardtii ACO63243 Micromonas sp. RCC299 NP_001048045 Oryza sativa Japonica Group NP_001049424 ( AK243037 ) Oryza sativa Japonica Group NP_001051067 Oryza sativa Japonica Group NP_001054133 Oryza sativa Japonica Group e_gw1.241.101.1 Physcomitrella patens subsp. patens e_gw1.40.194.1 Physcomitrella patens subsp. patens estExt_fgenesh1_kg.C_190003 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_190154 Physcomitrella patens subsp. patens estExt_fgenesh1_pm.C_3450002 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_3450001 Physcomitrella patens subsp. patens 29675.m000392 Ricinus communis 29726.m003921 Ricinus communis estExt_fgenesh1_kg.C_chr_220004 Thalassiosira pseudonana CCMP1335 XP_002947417 Volvox carteri f. nagariensis XP_002947554 Volvox carteri f. nagariensis XP_002956198 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR20852 1.4E-184 3 354 No hit NA SUPERFAMILY SSF54368 1.1E-18 17 102 IPR008147 Glutamine synthetase, beta-Grasp Pfam PF03951 2.1E-19 19 97 IPR008147 Glutamine synthetase, beta-Grasp ProSitePatterns PS00180 NA 55 72 IPR027302 Glutamine synthetase, N-terminal conserved site SUPERFAMILY SSF55931 3.0E-69 103 354 No hit NA Pfam PF00120 2.2E-61 104 350 IPR008146 Glutamine synthetase, catalytic domain ProSitePatterns PS00181 NA 237 253 IPR027303 Glutamine synthetase, glycine-rich site