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| Locus name | AT1G80350 |
| Alias | BOT1 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Signal transduction:microtubule organization |
| Effect for Senescence | promote |
| Gene Description | encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects |
| Evidence | Genetic evidence:Mutant [Ref 1]; Moleculare evidence: real time PCR [Ref 2] |
| References | 1: Bichet A, Desnos T, Turner S, Grandjean O, H_fte HBOTERO1 is required for normal orientation of cortical microtubules and anisotropic cell expansion in Arabidopsis.Plant J. 2001 Jan;25(2):137-482: Keech O, Pesquet E, Gutierrez L, Ahad A, Bellini C, Smith SM, Gardestr_m PLeaf senescePlant Physiol. 2010 Dec;154(4):1710-20 |
| Gene Ontology | |
| Sequence | AT1G80350.1 | Genomic | mRNA | CDS | Protein
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| Mutant name |
bot1 |
| Mutant/Transgenic |
mutant |
| Ecotype |
Col-0 |
| Mutagenesis type |
EMS |
miRNA Interaction  | |
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| Details | | target: AT1G80350.1
miRNA: ath-miR835-5p
miRNA: ath-miR835-5p
mfe: -23.3 kcal/mol
p-value: 0.012048
position: 1600
target 5' A C A C 3'
GAUAAAGAACAUGU G AAGA
CUAUUUCUUGUAUA C UUCU
miRNA 3' G U 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_128745 | |
| Cross Link | |
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| Localization | cytosol |
| Evidence | SUBAcon |
| Pubmed ID | 23180787 |
