Basic information
Locus name	AT1G20330
Alias	SMT2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	STEROL METHYLTRANSFERASE 2 (SMT2); FUNCTIONS IN: S-adenosylmethionine-dependent methyltransferase activity
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process metabolic process steroid biosynthetic process molecular function S-adenosylmethionine-dependent methyltransferase activity methyltransferase activity
Pathway	KEGG map00100 (EC 2.1.1.41) MetaCyc PWY-2541 PWY-6075
Sequence	AT1G20330.1 | Genomic | mRNA | CDS | Protein
Mutant information
Mutant name	cvp1-3
Mutant/Transgenic	mutant
Ecotype	Col-0
Mutagenesis type	EMS
Ortholog Group
Ortholog Groups: OG5_129172	Accession Taxon NP_001078579 Arabidopsis thaliana NP_173458 ( AT1G20330 ) Arabidopsis thaliana NP_177736 Arabidopsis thaliana NP_196875 Arabidopsis thaliana CMP275C Cyanidioschyzon merolae strain 10D 161904 Chlamydomonas reinhardtii ACO60646 Micromonas sp. RCC299 ACO63011 Micromonas sp. RCC299 NP_001048891 Oryza sativa Japonica Group NP_001059154 Oryza sativa Japonica Group e_gw1.08.00.232.1 Ostreococcus tauri fgenesh1_pm.C_Chr_03.0001000070 Ostreococcus tauri e_gw1.205.27.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_5050001 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_148000025 Physcomitrella patens subsp. patens fgenesh2_pg.scaffold_148000001 Physcomitrella patens subsp. patens 29010.m000216 Ricinus communis 29864.m001470 Ricinus communis 30170.m014288 Ricinus communis e_gw1.2.393.1 Thalassiosira pseudonana CCMP1335 e_gw1.9.118.1 Thalassiosira pseudonana CCMP1335 XP_002948023 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS51596 266.4 1 361 IPR025769 ERGosterol biosynthesis methyltransferase, plant PANTHER PTHR10108 3.7E-172 2 358 No hit NA SUPERFAMILY SSF53335 1.2E-52 77 354 No hit NA Pfam PF08241 5.8E-22 128 224 IPR013216 Methyltransferase type 11 Pfam PF08498 1.2E-15 292 355 IPR013705 Sterol methyltransferase C-terminal
Subcellular Localization
Localization	endoplasmic reticulum
Evidence	SUBAcon
Pubmed ID	23180787