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| Locus name | AT5G64550 |
| Organism | Arabidopsis thaliana | | Taxonomic identifier | [NCBI] | | Function category | Others | | Effect for Senescence | unclear | | Gene Description | loricrin-related gene | | Evidence | Genomic evidence:microarray data [Ref 1] | | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | | Sequence | AT5G64550.1 | Genomic | mRNA | CDS | Protein
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| | Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) | | Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
| | Details | | target: AT5G64550.1
miRNA: ath-miR773a
miRNA: ath-miR773a
mfe: -31.5 kcal/mol
p-value: 0.003768
position: 1851
target 5' A G 3'
AGAU AAAGCUGGAAGCAAG
UCUG UUUCGACCUUCGUUU
miRNA 3' C U 5'
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| Ortholog Group | |
| | Ortholog Groups: OG5_156242 | |
| Cross Link | |
| | Database | Entry ID | E-value | Start | End | InterPro ID | Description | | PANTHER | PTHR31827 | 3.3E-239 | 5 | 632 | No hit | NA |
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