Basic information
Locus name	AT1G23030
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	armadillo/beta-catenin repeat family protein / U-box domain-containing protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process protein ubiquitination cellular component ubiquitin ligase complex molecular function protein binding ubiquitin-protein ligase activity
Sequence	AT1G23030.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_170202	Accession Taxon NP_001117582 Arabidopsis thaliana NP_173716 ( AT1G23030 ) Arabidopsis thaliana NP_177258 Arabidopsis thaliana NP_001048024 Oryza sativa Japonica Group 29816.m000665 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23315 0.0 1 610 No hit NA SUPERFAMILY SSF57850 1.3E-28 232 315 No hit NA Pfam PF04564 4.6E-18 241 312 IPR003613 U box domain SMART SM00504 2.2E-30 244 307 IPR003613 U box domain SUPERFAMILY SSF48371 4.6E-48 331 607 IPR016024 Armadillo-type fold SMART SM00185 4.9E-5 362 402 IPR000225 Armadillo Pfam PF00514 1.1E-9 363 401 IPR000225 Armadillo ProSiteProfiles PS50176 11.9 373 415 IPR000225 Armadillo SMART SM00185 110.0 403 443 IPR000225 Armadillo SMART SM00185 1.4E-4 444 484 IPR000225 Armadillo Pfam PF00514 5.2E-8 445 483 IPR000225 Armadillo ProSiteProfiles PS50176 8.7 455 497 IPR000225 Armadillo SMART SM00185 12.0 485 526 IPR000225 Armadillo ProSiteProfiles PS50176 9.5 496 539 IPR000225 Armadillo SMART SM00185 23.0 527 567 IPR000225 Armadillo