Basic information
Locus name	AT1G25440
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	zinc finger (B-box type) family protein; FUNCTIONS IN: transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	cellular component intracellular molecular function protein binding zinc ion binding
Sequence	AT1G25440.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_141646	Accession Taxon NP_173915 ( AT1G25440 ) Arabidopsis thaliana NP_564932 Arabidopsis thaliana NP_001048022 Oryza sativa Japonica Group NP_001051053 Oryza sativa Japonica Group NP_001057333 Oryza sativa Japonica Group estExt_fgenesh1_pg.C_1430030 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_350041 Physcomitrella patens subsp. patens estExt_fgenesh2_pg.C_1080030 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_2000003 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_79000104 Physcomitrella patens subsp. patens fgenesh2_pg.scaffold_112000051 Physcomitrella patens subsp. patens fgenesh2_pg.scaffold_76000052 Physcomitrella patens subsp. patens 27524.m000294 Ricinus communis 28207.m000104 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31874 3.3E-160 1 417 No hit NA ProSiteProfiles PS50119 10.8 12 59 IPR000315 Zinc finger, B-box SMART SM00336 8.0E-10 12 59 IPR000315 Zinc finger, B-box Pfam PF00643 4.6E-6 14 57 IPR000315 Zinc finger, B-box Coils Coil NA 215 236 No hit NA Pfam PF06203 3.3E-19 361 404 IPR010402 CCT domain ProSiteProfiles PS51017 16.1 361 403 IPR010402 CCT domain
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787