Basic information   
Locus name AT1G28310
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryTranscription regulation(Dof)
Effect for Senescenceunclear
Gene DescriptionDof-type zinc finger domain-containing protein; FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription.
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
biological process
molecular function
SequenceAT1G28310.1 | Genomic | mRNA | CDS | Protein
AT1G28310.2 | Genomic | mRNA | CDS | Protein
miRNA Interaction      
Details
target: AT1G28310.1 
miRNA: ath-miR5658
miRNA: ath-miR5658
mfe: -28.6 kcal/mol 
p-value: 0.001071 

position: 1171 
target 5' G                    C  3' 
           UUCAU GUCAUCAUCAUCAU     
           AAGUA UAGUAGUAGUAGUA     
miRNA  3' A     G                 5' 

target: AT1G28310.2 
miRNA: ath-miR5658
miRNA: ath-miR5658
mfe: -28.6 kcal/mol 
p-value: 0.001064 

position: 859 
target 5' G                    C  3' 
           UUCAU GUCAUCAUCAUCAU     
           AAGUA UAGUAGUAGUAGUA     
miRNA  3' A     G                 5' 
Ortholog Group      
Ortholog Groups: OG5_177246
AccessionTaxon
NP_001031100 ( AT1G28310 ) Arabidopsis thaliana
NP_174152Arabidopsis thaliana
30190.m011331Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR319929.4E-4136316No hitNA
PfamPF027018.7E-363797IPR003851Zinc finger, Dof-type
ProSiteProfilesPS5088428.94195IPR003851Zinc finger, Dof-type
ProSitePatternsPS01361NA4379IPR003851Zinc finger, Dof-type
Subcellular Localization   
Localizationnucleus
EvidenceSUBAcon
Pubmed ID23180787