Basic information
Locus name	AT1G15860
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	Unknown protein. Gene expression is increased during leaf senescence.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT1G15860.1 | Genomic | mRNA | CDS | Protein AT1G15860.2 | Genomic | mRNA | CDS | Protein AT1G15860.3 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT1G15860.1  miRNA: ath-miR5650 miRNA: ath-miR5650 mfe: -28.3 kcal/mol  p-value: 0.000804  position: 624  target 5' A      A              C  3'             GUAUUU AAGAUCCAAAACGA                 CAUAGA UUCUAGGUUUUGUU      miRNA  3' A                        5'  target: AT1G15860.2  miRNA: ath-miR5650 miRNA: ath-miR5650 mfe: -28.3 kcal/mol  p-value: 0.000941  position: 729  target 5' A      A              C  3'             GUAUUU AAGAUCCAAAACGA                 CAUAGA UUCUAGGUUUUGUU      miRNA  3' A                        5'
Ortholog Group
Ortholog Groups: OG5_130249	Accession Taxon NP_001154344 ( AT1G15860 ) Arabidopsis thaliana NP_563983 Arabidopsis thaliana 29588.m000870 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF47473 1.3E-5 29 193 No hit NA ProSiteProfiles PS51229 44.4 32 223 IPR005176 Potentiating neddylation domain PANTHER PTHR12281 1.4E-73 34 227 IPR014764 Defective-in-cullin neddylation protein Pfam PF03556 9.3E-30 105 223 IPR005176 Potentiating neddylation domain