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About
Basic information
Locus name
AT5G06250
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:ABI3VP1
Effect for Senescence
Unclear
Gene Description
Upregulated in senescent leaves
Evidence
Molecular evidence:Real-Time PCR [Ref 1]
References
1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B
Transcription factors regulating leaf senescence in Arabidopsis thaliana.
Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology
biological process
regulation of transcription, DNA-dependent
molecular function
DNA binding
Sequence
AT5G06250.1 |
Genomic
|
mRNA
|
CDS
|
Protein
AT5G06250.2 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_156374
Accession
Taxon
NP_001119177
( AT5G06250 )
Arabidopsis thaliana
NP_181152
Arabidopsis thaliana
NP_187765
Arabidopsis thaliana
NP_196243
Arabidopsis thaliana
NP_850260
Arabidopsis thaliana
NP_850559
Arabidopsis thaliana
NP_001065792
Oryza sativa Japonica Group
30032.m000462
Ricinus communis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR31140
9.3E-74
15
263
No hit
NA
SUPERFAMILY
SSF101936
4.2E-31
44
158
IPR015300
DNA-binding pseudobarrel domain
Pfam
PF02362
6.7E-31
46
158
IPR003340
B3 DNA binding domain
ProSiteProfiles
PS50863
14.6
46
159
IPR003340
B3 DNA binding domain
SMART
SM01019
3.0E-27
46
159
IPR003340
B3 DNA binding domain
Mutant Image
normal leaf senescence
Subcellular Localization
Localization
nucleus
Evidence
SUBAcon
Pubmed ID
23180787