Basic information
Locus name	AT1G18270
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	ketose-bisphosphate aldolase class-II family protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process carbohydrate metabolic process oxidation-reduction process pentose-phosphate shunt molecular function aldehyde-lyase activity oxidoreductase activity phosphogluconate dehydrogenase (decarboxylating) activity zinc ion binding
Sequence	AT1G18270.1 | Genomic | mRNA | CDS | Protein AT1G18270.2 | Genomic | mRNA | CDS | Protein AT1G18270.3 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT1G18270.1  miRNA: ath-miR5021 miRNA: ath-miR5021 mfe: -26.5 kcal/mol  p-value: 0.002524  position: 4389  target 5' G                    G  3'             UUUUUUUUUUCUUUUUCUCA                 AAAAGAAGAAGAAGAAGAGU      miRNA  3'                         5'  target: AT1G18270.2  miRNA: ath-miR5021 miRNA: ath-miR5021 mfe: -26.5 kcal/mol  p-value: 0.002526  position: 4392  target 5' G                    G  3'             UUUUUUUUUUCUUUUUCUCA                 AAAAGAAGAAGAAGAAGAGU      miRNA  3'                         5'  target: AT1G18270.3  miRNA: ath-miR5021 miRNA: ath-miR5021 mfe: -26.5 kcal/mol  p-value: 0.002570  position: 4449  target 5' G                    G  3'             UUUUUUUUUUCUUUUUCUCA                 AAAAGAAGAAGAAGAAGAGU      miRNA  3'                         5'
Ortholog Group
Ortholog Groups: OG5_129214	Accession Taxon NP_001117303 ( AT1G18270 ) Arabidopsis thaliana NP_173263 Arabidopsis thaliana NP_001057323 Oryza sativa Japonica Group estExt_gwp_gw1.C_1370022 Physcomitrella patens subsp. patens 29651.m000281 Ricinus communis XP_002959993 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description Pfam PF03446 4.8E-22 5 164 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding SUPERFAMILY SSF51735 1.2E-19 5 161 No hit NA PANTHER PTHR22981 0.0 56 673 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type SUPERFAMILY SSF48179 9.5E-22 168 294 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like Pfam PF03446 5.7E-35 322 481 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding SUPERFAMILY SSF51735 7.7E-31 322 481 No hit NA ProSitePatterns PS00895 NA 326 339 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site SUPERFAMILY SSF48179 7.0E-34 488 615 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like SUPERFAMILY SSF142764 1.7E-67 655 1087 No hit NA Pfam PF07005 4.4E-26 824 1046 IPR010737 Protein of unknown function, DUF1537 SUPERFAMILY SSF51569 3.1E-85 1090 1373 No hit NA TIGRFAM TIGR00167 3.9E-72 1094 1373 IPR000771 Ketose-bisphosphate aldolase, class-II Pfam PF01116 4.0E-90 1095 1373 IPR000771 Ketose-bisphosphate aldolase, class-II
Subcellular Localization
Localization 1 Localization plasma membrane Evidence SUBAcon Pubmed ID 23180787
Localization 2 Localization plasma membrane,peroxisome Evidence SUBAcon Pubmed ID 23180787