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About
Basic information
Locus name
AT4G17490
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:AP2-EREBP
Effect for Senescence
Unclear
Gene Description
Upregulated in senescent leaves
Evidence
Molecular evidence:Real-Time PCR [Ref 1]
References
1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B
Transcription factors regulating leaf senescence in Arabidopsis thaliana.
Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology
biological process
regulation of transcription, DNA-dependent
molecular function
sequence-specific DNA binding transcription factor activity
Sequence
AT4G17490.1 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_160397
Accession
Taxon
NP_567529
( AT4G17490 )
Arabidopsis thaliana
NP_568679
Arabidopsis thaliana
NP_001047616
Oryza sativa Japonica Group
NP_001053475
Oryza sativa Japonica Group
NP_001065396
Oryza sativa Japonica Group
27401.m000291
Ricinus communis
28552.m000029
Ricinus communis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR31190
3.1E-23
132
208
No hit
NA
Pfam
PF00847
6.5E-15
136
186
IPR001471
AP2/ERF domain
ProSiteProfiles
PS51032
23.4
136
194
IPR001471
AP2/ERF domain
SMART
SM00380
1.1E-34
136
200
IPR001471
AP2/ERF domain
SUPERFAMILY
SSF54171
6.0E-22
136
196
IPR016177
DNA-binding, integrase-type
PRINTS
PR00367
2.2E-10
137
148
IPR001471
AP2/ERF domain
PRINTS
PR00367
2.2E-10
160
176
IPR001471
AP2/ERF domain
Subcellular Localization
Localization
nucleus
Evidence
SUBAcon
Pubmed ID
23180787