Basic information
Locus name	AT4G32800
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:AP2-EREBP
Effect for Senescence	Unclear
Gene Description	Upregulated in senescent leaves
Evidence	Molecular evidence:Real-Time PCR [Ref 1]
References	1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B Transcription factors regulating leaf senescence in Arabidopsis thaliana. Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function sequence-specific DNA binding transcription factor activity
Sequence	AT4G32800.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT4G32800.1  miRNA: ath-miR447c miRNA: ath-miR447c mfe: -30.6 kcal/mol  p-value: 0.001398  position:  677  target 5' G        C             U 3'             UAACGAAA GGUGUCGUUCUCA              GUUGUUUU CUACAGCAGGGGU   miRNA  3'                        U 5'  target: AT4G32800.1  miRNA: ath-miR776 miRNA: ath-miR776 mfe: -21.4 kcal/mol  p-value: 0.058512  position:  822  target 5' U       U            U 3'             GAC UCG UGGAGGAUUUGG              UUG AGU AUCUUCUGAAUC   miRNA  3'     U   U            U 5'
Ortholog Group
Ortholog Groups: OG5_137536	Accession Taxon NP_177844 Arabidopsis thaliana NP_195006 ( AT4G32800 ) Arabidopsis thaliana NP_565609 Arabidopsis thaliana e_gw1.60.212.1 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_4800009 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_150120 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_550163 Physcomitrella patens subsp. patens gw1.117.121.1 Physcomitrella patens subsp. patens gw1.133.82.1 Physcomitrella patens subsp. patens gw1.14.214.1 Physcomitrella patens subsp. patens gw1.15.199.1 Physcomitrella patens subsp. patens gw1.155.87.1 Physcomitrella patens subsp. patens gw1.259.37.1 Physcomitrella patens subsp. patens gw1.259.39.1 Physcomitrella patens subsp. patens gw1.276.83.1 Physcomitrella patens subsp. patens gw1.296.16.1 Physcomitrella patens subsp. patens gw1.480.6.1 Physcomitrella patens subsp. patens gw1.55.249.1 Physcomitrella patens subsp. patens gw1.8.141.1 Physcomitrella patens subsp. patens
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31985 9.7E-98 3 217 No hit NA Pfam PF00847 1.8E-14 17 67 IPR001471 AP2/ERF domain ProSiteProfiles PS51032 22.6 18 75 IPR001471 AP2/ERF domain SMART SM00380 2.4E-34 18 81 IPR001471 AP2/ERF domain SUPERFAMILY SSF54171 1.1E-20 18 75 IPR016177 DNA-binding, integrase-type PRINTS PR00367 5.5E-10 19 30 IPR001471 AP2/ERF domain PRINTS PR00367 5.5E-10 41 57 IPR001471 AP2/ERF domain
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787