Basic information
Locus name	AT4G37750
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:AP2-EREBP
Effect for Senescence	Unclear
Gene Description	Upregulated in senescent leaves
Evidence	Molecular evidence:Real-Time PCR [Ref 1]
References	1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B Transcription factors regulating leaf senescence in Arabidopsis thaliana. Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function sequence-specific DNA binding transcription factor activity
Sequence	AT4G37750.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT4G37750.1  miRNA: ath-miR2938 miRNA: ath-miR2938 mfe: -26.5 kcal/mol  p-value: 0.031283  position:  557  target 5' A     G        C     U 3'             UGGAA C UCUCAA AGAUC              ACCUU G AGAGUU UCUAG   miRNA  3' G     G G      U       5'
Ortholog Group
Ortholog Groups: OG5_135471	Accession Taxon NP_175530 Arabidopsis thaliana NP_177401 Arabidopsis thaliana NP_188720 Arabidopsis thaliana NP_195489 ( AT4G37750 ) Arabidopsis thaliana NP_197245 Arabidopsis thaliana NP_200549 Arabidopsis thaliana ACO62577 Micromonas sp. RCC299 NP_001045103 Oryza sativa Japonica Group NP_001049466 Oryza sativa Japonica Group NP_001049927 Oryza sativa Japonica Group NP_001054108 Oryza sativa Japonica Group NP_001058256 Oryza sativa Japonica Group e_gw1.03.00.529.1 Ostreococcus tauri e_gw1.131.48.1 Physcomitrella patens subsp. patens e_gw1.66.73.1 Physcomitrella patens subsp. patens e_gw1.66.94.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1310105 Physcomitrella patens subsp. patens 28976.m000163 Ricinus communis 29562.m000029 Ricinus communis 29706.m001286 Ricinus communis 29929.m004537 Ricinus communis XP_002950394 Volvox carteri f. nagariensis XP_002957429 Volvox carteri f. nagariensis XP_002957465 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR32467 1.0E-169 202 469 No hit NA Pfam PF00847 3.7E-13 282 341 IPR001471 AP2/ERF domain SUPERFAMILY SSF54171 2.3E-16 282 350 IPR016177 DNA-binding, integrase-type ProSiteProfiles PS51032 18.8 283 349 IPR001471 AP2/ERF domain SMART SM00380 1.5E-26 283 355 IPR001471 AP2/ERF domain PRINTS PR00367 1.2E-6 284 295 IPR001471 AP2/ERF domain Pfam PF00847 8.7E-14 384 435 IPR001471 AP2/ERF domain SUPERFAMILY SSF54171 6.5E-18 384 444 IPR016177 DNA-binding, integrase-type ProSiteProfiles PS51032 19.0 385 443 IPR001471 AP2/ERF domain SMART SM00380 3.8E-34 385 449 IPR001471 AP2/ERF domain PRINTS PR00367 1.2E-6 425 445 IPR001471 AP2/ERF domain
Subcellular Localization
Localization 1 Localization nucleus Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization nucleus Evidence SUBAcon Pubmed ID 23180787