Leaf Senescence DataBase

Basic information

Locus name

AT1G31600

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

Redox regulation

Effect for Senescence

unclear

Gene Description

oxidoreductase, 2OG-Fe(II) oxygenase family protein; FUNCTIONS IN: oxidoreductase activity, nucleic acid binding

Evidence

Genomic evidence:microarray data [Ref 1]

References

1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology

biological process	oxidation-reduction process
molecular function	nucleic acid binding oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors oxidoreductase activity

Sequence

Ortholog Group

Ortholog Groups: OG5_133401

Accession	Taxon
NP_174442	Arabidopsis thaliana
NP_973945	Arabidopsis thaliana
NP_973946 ( AT1G31600 )	Arabidopsis thaliana
171012	Chlamydomonas reinhardtii
ACO70564	Micromonas sp. RCC299
NP_001053775	Oryza sativa Japonica Group
1100010070	Ostreococcus tauri
gw1.114.90.1	Physcomitrella patens subsp. patens
29827.m002638	Ricinus communis

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PANTHER	PTHR13069	2.2E-229	69	431	No hit	NA
SUPERFAMILY	SSF54928	2.0E-9	95	188	No hit	NA
ProSiteProfiles	PS50102	10.7	109	187	IPR000504	RNA recognition motif domain
Pfam	PF13893	1.9E-7	128	185	No hit	NA
SUPERFAMILY	SSF51197	7.0E-33	210	413	No hit	NA
Pfam	PF13532	5.9E-18	248	410	IPR027450	Alpha-ketoglutarate-dependent dioxygenase AlkB-like
ProSiteProfiles	PS51471	9.2	293	413	IPR005123	Oxoglutarate/iron-dependent dioxygenase