Basic information   
Locus name AT1G43710
Aliasemb1075
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers
Effect for Senescenceunclear
Gene Descriptionembryo defective 1075 (emb1075); FUNCTIONS IN: pyridoxal phosphate binding, carboxy-lyase activity, catalytic activity; INVOLVED IN: embryonic development ending in seed dormancy, amino acid metabolic process
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
biological process
molecular function
SequenceAT1G43710.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction      
Details
target: AT1G43710.1 
miRNA: ath-miR865-3p
miRNA: ath-miR865-3p
mfe: -24.5 kcal/mol 
p-value: 0.002867 

position: 766 
target 5' A   U                  G  3' 
           UUG GAU GAUUUGAGGAAGAA     
           AAC CUA UUAAACUCCUUUUU     
miRNA  3'         U                 5' 
Ortholog Group      
Ortholog Groups: OG5_149309
AccessionTaxon
NP_175036 ( AT1G43710 ) Arabidopsis thaliana
40158Chlamydomonas reinhardtii
NP_001047064Oryza sativa Japonica Group
estExt_Genewise1.C_130113Physcomitrella patens subsp. patens
estExt_Genewise1.C_470113Physcomitrella patens subsp. patens
29982.m000222Ricinus communis
gw1.9.64.1Thalassiosira pseudonana CCMP1335
XP_002953989Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SUPERFAMILYSSF533831.2E-7891453IPR015424Pyridoxal phosphate-dependent transferase
PANTHERPTHR119991.6E-241126482No hitNA
PfamPF002821.7E-25148407IPR002129Pyridoxal phosphate-dependent decarboxylase
ProSitePatternsPS00392NA307328IPR021115Pyridoxal-phosphate binding site
Subcellular Localization   
Localizationcytosol
EvidenceSUBAcon
Pubmed ID23180787