Basic information
Locus name	AT1G47270
Alias	AtTLP6
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation(TLP)
Effect for Senescence	unclear
Gene Description	TUBBY LIKE PROTEIN 6 (AtTLP6); FUNCTIONS IN: transcription factor activity, phosphoric diester hydrolase activity; INVOLVED IN: regulation of transcription
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT1G47270.1 | Genomic | mRNA | CDS | Protein AT1G47270.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_212019	Accession Taxon NP_175160 ( AT1G47270 ) Arabidopsis thaliana 30170.m014061 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR16517 1.3E-213 25 412 No hit NA SUPERFAMILY SSF81383 3.3E-7 60 111 IPR001810 F-box domain, cyclin-like Pfam PF12937 1.3E-6 69 110 No hit NA SUPERFAMILY SSF54518 1.0E-93 117 412 IPR025659 Tubby C-terminal-like domain Pfam PF01167 5.8E-97 132 406 IPR000007 Tubby, C-terminal PRINTS PR01573 2.5E-75 184 200 IPR000007 Tubby, C-terminal PRINTS PR01573 2.5E-75 200 224 IPR000007 Tubby, C-terminal PRINTS PR01573 2.5E-75 243 270 IPR000007 Tubby, C-terminal PRINTS PR01573 2.5E-75 319 336 IPR000007 Tubby, C-terminal PRINTS PR01573 2.5E-75 337 353 IPR000007 Tubby, C-terminal ProSitePatterns PS01200 NA 337 350 IPR018066 Tubby, C-terminal, conserved site PRINTS PR01573 2.5E-75 369 388 IPR000007 Tubby, C-terminal PRINTS PR01573 2.5E-75 390 412 IPR000007 Tubby, C-terminal