Basic information   
Locus name AT1G48040
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryProtein degradation/modification
Effect for Senescenceunclear
Gene Descriptioncatalytic/ protein serine/threonine phosphatase; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
biological process
molecular function
SequenceAT1G48040.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction      
Details
target: AT1G48040.1 
miRNA: ath-miR856
miRNA: ath-miR856
mfe: -32.0 kcal/mol 
p-value: 0.000057 

position: 1506 
target 5' C                     U  3' 
           CUGAAGUU UUGGUAGGAUUA     
           GACUUCAA AACCAUCCUAAU     
miRNA  3' C        U               5' 
Ortholog Group      
Ortholog Groups: OG5_149969
AccessionTaxon
NP_175238 ( AT1G48040 ) Arabidopsis thaliana
NP_188351Arabidopsis thaliana
NP_191785Arabidopsis thaliana
NP_850737Arabidopsis thaliana
NP_001042801Oryza sativa Japonica Group
NP_001054565Oryza sativa Japonica Group
29889.m003359Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR138326.6E-2121379IPR015655Protein phosphatase 2C
SMARTSM003322.1E-7968347IPR001932Protein phosphatase 2C (PP2C)-like
SUPERFAMILYSSF816068.5E-7272351IPR001932Protein phosphatase 2C (PP2C)-like
PfamPF004814.4E-6487342IPR001932Protein phosphatase 2C (PP2C)-like
SMARTSM003310.093349IPR001932Protein phosphatase 2C (PP2C)-like
ProSitePatternsPS01032NA116124IPR000222Protein phosphatase 2C, manganese/magnesium aspartate binding site