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Basic information
Locus name
AT3G17600
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:AUX-IAA
Effect for Senescence
Unclear
Gene Description
Upregulated in senescent leaves
Evidence
Molecular evidence:Real-Time PCR [Ref 1]
References
1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B
Transcription factors regulating leaf senescence in Arabidopsis thaliana.
Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology
biological process
regulation of transcription, DNA-dependent
cellular component
nucleus
molecular function
protein dimerization activity
Sequence
AT3G17600.1 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_164505
Accession
Taxon
NP_182222
Arabidopsis thaliana
NP_188387
( AT3G17600 )
Arabidopsis thaliana
NP_191769
Arabidopsis thaliana
NP_001042778
Oryza sativa Japonica Group
NP_001047972
Oryza sativa Japonica Group
30076.m004546
Ricinus communis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
Pfam
PF02309
8.0E-36
17
155
IPR003311
AUX/IAA protein
SUPERFAMILY
SSF54277
4.5E-19
67
152
No hit
NA
PANTHER
PTHR31734
6.9E-24
73
152
No hit
NA
ProSiteProfiles
PS50962
30.6
73
156
IPR011525
Aux/IAA-ARF-dimerisation
Subcellular Localization
Localization
nucleus
Evidence
SUBAcon
Pubmed ID
23180787