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Locus name | AT1G56010 |
Alias | NAC1 | Organism | Arabidopsis thaliana | Taxonomic identifier | [NCBI] | Function category | Transcription regulation(NAC) | Effect for Senescence | unclear | Gene Description | NAC1; FUNCTIONS IN: transcription factor activity | Evidence | Genomic evidence:microarray data [Ref 1] | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | Gene Ontology | | Sequence | AT1G56010.1 | Genomic | mRNA | CDS | Protein AT1G56010.2 | Genomic | mRNA | CDS | Protein
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| Mutant name |
nac1 | Mutant/Transgenic |
mutant | Ecotype |
Col-0 |
Mutagenesis type |
T-DNA insertion_knock out |
miRNA Interaction | |
| Details | | target: AT1G56010.1 miRNA: ath-miR164a miRNA: ath-miR164a mfe: -43.4 kcal/mol p-value: 0.000042
position: 777 target 5' A A A 3' GCACGU CCCUGCUUCUCCA CGUGCA GGGACGAAGAGGU miRNA 3' A C 5'
target: AT1G56010.1 miRNA: ath-miR164b miRNA: ath-miR164b mfe: -43.4 kcal/mol p-value: 0.000031
position: 777 target 5' A A A 3' GCACGU CCCUGCUUCUCCA CGUGCA GGGACGAAGAGGU miRNA 3' A C 5'
target: AT1G56010.1 miRNA: ath-miR164c miRNA: ath-miR164c mfe: -43.4 kcal/mol p-value: 0.000087
position: 777 target 5' A A A 3' GCACGU CCCUGCUUCUCCA CGUGCA GGGACGAAGAGGU miRNA 3' G C 5'
target: AT1G56010.2 miRNA: ath-miR164a miRNA: ath-miR164a mfe: -43.4 kcal/mol p-value: 0.000043
position: 802 target 5' A A A 3' GCACGU CCCUGCUUCUCCA CGUGCA GGGACGAAGAGGU miRNA 3' A C 5'
target: AT1G56010.2 miRNA: ath-miR164b miRNA: ath-miR164b mfe: -43.4 kcal/mol p-value: 0.000032
position: 802 target 5' A A A 3' GCACGU CCCUGCUUCUCCA CGUGCA GGGACGAAGAGGU miRNA 3' A C 5'
target: AT1G56010.2 miRNA: ath-miR164c miRNA: ath-miR164c mfe: -43.4 kcal/mol p-value: 0.000089
position: 802 target 5' A A A 3' GCACGU CCCUGCUUCUCCA CGUGCA GGGACGAAGAGGU miRNA 3' G C 5'
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Ortholog Group | |
| Ortholog Groups: OG5_164225 | |
Cross Link | |
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| Localization | nucleus | Evidence | SUBAcon | Pubmed ID | 23180787 |
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