Leaf Senescence DataBase

Basic information

Locus name

AT1G60430

Alias

ARPC3

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

Others(structural molecule activity)

Effect for Senescence

unclear

Gene Description

actin-related protein C3 (ARPC3); FUNCTIONS IN: structural molecule activity; INVOLVED IN: actin filament organization; LOCATED IN: Arp2/3 protein complex;

Evidence

Genomic evidence:microarray data [Ref 1]

References

1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology

biological process	Arp2/3 complex-mediated actin nucleation regulation of actin filament polymerization
cellular component	Arp2/3 protein complex

Sequence

Ortholog Group

Ortholog Groups: OG5_128778

Accession	Taxon
NP_001077743 ( AT1G60430 )	Arabidopsis thaliana
NP_564757	Arabidopsis thaliana
117962	Chlamydomonas reinhardtii
NP_001046384	Oryza sativa Japonica Group
estExt_fgenesh1_pg.C_1410015	Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_470079	Physcomitrella patens subsp. patens
27394.m000348	Ricinus communis
XP_002955200	Volvox carteri f. nagariensis

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PANTHER	PTHR12391	5.6E-103	1	170	IPR007204	ARP2/3 complex, 21kDa subunit (p21-Arc)
PIRSF	PIRSF016315	2.3E-112	1	174	IPR007204	ARP2/3 complex, 21kDa subunit (p21-Arc)
Pfam	PF04062	3.4E-64	2	171	IPR007204	ARP2/3 complex, 21kDa subunit (p21-Arc)
SUPERFAMILY	SSF69060	7.1E-65	2	171	IPR007204	ARP2/3 complex, 21kDa subunit (p21-Arc)

Subcellular Localization

Localization

cytosol

Evidence

SUBAcon

Pubmed ID

23180787