Basic information
Locus name	AT1G67500
Alias	ATREV3
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	ARABIDOPSIS THALIANA RECOVERY PROTEIN 3 (ATREV3); FUNCTIONS IN: DNA-directed DNA polymerase activity, DNA binding; INVOLVED IN: response to UV, DNA repair, response to UV-B
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process nucleobase-containing compound metabolic process molecular function DNA-directed DNA polymerase activity nucleic acid binding nucleotide binding
Pathway	KEGG map00230 (EC 2.7.7.7) map00240 (EC 2.7.7.7)
Sequence	AT1G67500.1 | Genomic | mRNA | CDS | Protein AT1G67500.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128651	Accession Taxon NP_176917 ( AT1G67500 ) Arabidopsis thaliana NP_564674 Arabidopsis thaliana CMR103C Cyanidioschyzon merolae strain 10D 117843 Chlamydomonas reinhardtii ACO66634 Micromonas sp. RCC299 NP_001059427 Oryza sativa Japonica Group 30128.m008782 Ricinus communis thaps1_ua_kg.chr_14000129 Thalassiosira pseudonana CCMP1335 XP_002955626 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10322 0.0 3 1885 No hit NA SUPERFAMILY SSF53098 1.7E-65 35 187 IPR012337 Ribonuclease H-like domain Pfam PF03104 4.5E-7 55 193 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain SMART SM00486 3.9E-119 1031 1533 IPR006172 DNA-directed DNA polymerase, family B SUPERFAMILY SSF53098 1.7E-65 1031 1159 IPR012337 Ribonuclease H-like domain Pfam PF03104 3.0E-7 1032 1229 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain SUPERFAMILY SSF53098 1.7E-65 1193 1302 IPR012337 Ribonuclease H-like domain Pfam PF00136 2.0E-95 1303 1744 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain SUPERFAMILY SSF56672 4.6E-111 1342 1754 No hit NA PRINTS PR00106 2.6E-9 1355 1368 IPR006172 DNA-directed DNA polymerase, family B PRINTS PR00106 2.6E-9 1463 1475 IPR006172 DNA-directed DNA polymerase, family B PRINTS PR00106 2.6E-9 1519 1527 IPR006172 DNA-directed DNA polymerase, family B ProSitePatterns PS00116 NA 1521 1529 IPR017964 DNA-directed DNA polymerase, family B, conserved site Pfam PF14260 1.2E-15 1789 1862 IPR025687 C4-type zinc-finger of DNA polymerase delta