Home
Browse
Species Table
Species Tree
Mutant
Mutant Arabidopsis Seeds
Mutant Rice Seeds
Sen-ASVs
Phenotype
Chlorophyll Degradation
Stay-green QTL
Ecotype
Public Transcriptomic
Sen-smallRNA
SAGs in Poplar
SAGs in Kalanchoe serrata
Sen-TF ChIP/DAP-Seq
SAP in Arabidopsis
SAP in Soybean
Targets of Sen-AtlncRNAs
SLAGs and Mutants
Seed-Storage Times
Search
Text Search
BLAST Search
Help
User Guide
FAQs
How to Cite
Download
Links
About
Basic information
Locus name
AT3G61950
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:bHLH
Effect for Senescence
Unclear
Gene Description
Upregulated in senescent leaves
Evidence
Molecular evidence:Real-Time PCR [Ref 1]
References
1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B
Transcription factors regulating leaf senescence in Arabidopsis thaliana.
Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology
molecular function
protein dimerization activity
Sequence
AT3G61950.1 |
Genomic
|
mRNA
|
CDS
|
Protein
AT3G61950.2 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_177760
Accession
Taxon
NP_182204
Arabidopsis thaliana
NP_567121
( AT3G61950 )
Arabidopsis thaliana
NP_850735
Arabidopsis thaliana
30076.m004456
Ricinus communis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR32088
7.5E-161
22
355
No hit
NA
SUPERFAMILY
SSF47459
6.2E-17
174
245
IPR011598
Myc-type, basic helix-loop-helix (bHLH) domain
ProSiteProfiles
PS50888
15.5
175
226
IPR011598
Myc-type, basic helix-loop-helix (bHLH) domain
Pfam
PF00010
2.2E-11
176
226
IPR011598
Myc-type, basic helix-loop-helix (bHLH) domain
SMART
SM00353
2.1E-10
181
232
IPR011598
Myc-type, basic helix-loop-helix (bHLH) domain
Coils
Coil
NA
223
244
No hit
NA
Subcellular Localization
Localization
nucleus
Evidence
SUBAcon
Pubmed ID
23180787