Basic information
Locus name	AT1G71100
Alias	RSW10
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	RADIAL SWELLING 10 (RSW10); FUNCTIONS IN: ribose-5-phosphate isomerase activity; INVOLVED IN: uridine biosynthetic process, cellulose biosynthetic process
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process pentose-phosphate shunt, non-oxidative branch molecular function ribose-5-phosphate isomerase activity
Pathway	KEGG map00030 (EC 5.3.1.6) map00710 (EC 5.3.1.6) MetaCyc PWY-1861
Sequence	AT1G71100.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127414	Accession Taxon NP_177266 ( AT1G71100 ) Arabidopsis thaliana NP_178238 Arabidopsis thaliana NP_187130 Arabidopsis thaliana CMO291C Cyanidioschyzon merolae strain 10D 55838 Chlamydomonas reinhardtii ACO62254 Micromonas sp. RCC299 NP_001052419 Oryza sativa Japonica Group NP_001059023 Oryza sativa Japonica Group estExt_genewise1.C_Chr_05.00010375 Ostreococcus tauri e_gw1.106.125.1 Physcomitrella patens subsp. patens e_gw1.234.25.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_2180066 Physcomitrella patens subsp. patens estExt_Genewise1.C_2830044 Physcomitrella patens subsp. patens 29932.m000590 Ricinus communis 30128.m008607 Ricinus communis e_gw1.2.419.1 Thalassiosira pseudonana CCMP1335 e_gw1.2.426.1 Thalassiosira pseudonana CCMP1335 XP_002950439 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11934 1.3E-111 21 265 IPR004788 Ribose 5-phosphate isomerase, type A SUPERFAMILY SSF100950 3.2E-41 28 174 No hit NA Hamap MF_00170 29.8 29 263 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup TIGRFAM TIGR00021 3.2E-72 32 260 IPR004788 Ribose 5-phosphate isomerase, type A Pfam PF06026 2.2E-59 77 260 IPR004788 Ribose 5-phosphate isomerase, type A SUPERFAMILY SSF75445 1.2E-15 161 246 No hit NA
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787